Effective results for Streptomyces cattleya NRRL 8057 = DSM 46488 (eggnog40)

Summary

Number of putative secreted proteins: 63
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 19 eukaryotic-like domains, contained in 63 proteins (5 high, 58 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
1003195.SCAT_0183(PF08242)(ER)
1003195.SCAT_4833(PF12222)mitochondrial
1003195.SCAT_5006(PF01927)mitochondrial
1003195.SCAT_5670(PF02057)mitochondrial
1003195.SCAT_2670(PF08242)mitochondrial
1003195.SCAT_2650(PF09924)(ER)
1003195.SCAT_1221(PF12051)mitochondrial
1003195.SCAT_3732(PF13613) (PF01609)
1003195.SCAT_0148(PF13613) (PF01609)
1003195.SCAT_0182(PF13613) (PF01609)
1003195.SCAT_2310(PF13613) (PF01609)
1003195.SCAT_3577(PF08242)plastid
1003195.SCAT_3744(PF13613) (PF01609)
1003195.SCAT_4984(PF13613) (PF01609)
1003195.SCAT_4297(PF13613) (PF01609)
1003195.SCAT_3166(PF13613) (PF01609)
1003195.SCAT_5820(PF13613) (PF01609)
1003195.SCAT_3403(PF13613) (PF01609)
1003195.SCAT_2536(PF13613) (PF01609)
1003195.SCAT_2987(PF13613) (PF01609)
1003195.SCAT_5412(PF09924)(ER)
1003195.SCAT_1510(PF09924)(ER)
1003195.SCAT_3737(PF13551)
1003195.SCAT_1129(PF13936)
1003195.SCAT_4268PF16715
1003195.SCAT_2209(PF12051)
1003195.SCAT_0529(PF01135)
1003195.SCAT_3359(PF13936)
1003195.SCAT_1217(PF08242)
1003195.SCAT_1516(PF01609)
1003195.SCAT_3159(PF13551)
1003195.SCAT_2633(PF01609)
1003195.SCAT_3238(PF01135)
1003195.SCAT_4875(PF01532)
1003195.SCAT_3416PF08213not used
1003195.SCAT_3647(PF09445)
1003195.SCAT_5780(PF01609)
1003195.SCAT_0901PF16715
1003195.SCAT_3579(PF08242)
1003195.SCAT_5116(PF13551)
1003195.SCAT_2819(PF01135)
1003195.SCAT_5005(PF01927)
1003195.SCAT_5587(PF09924)
1003195.SCAT_1482(PF13936)
1003195.SCAT_0530(PF01135)
1003195.SCAT_1428(PF01609)
1003195.SCAT_5509(PF01927)
1003195.SCAT_3160(PF13551)
1003195.SCAT_0849(PF03803)
1003195.SCAT_4653(PF01135)
1003195.SCAT_0380(PF05185)
1003195.SCAT_3618(PF00163)
1003195.SCAT_5821PF08939
1003195.SCAT_0198PF16715
1003195.SCAT_2673(PF13936)
1003195.SCAT_3675(PF13936)
1003195.SCAT_3249(PF01135)
1003195.SCAT_0242(PF01609)
1003195.SCAT_5320(PF00163)
1003195.SCAT_2281(PF13936)not used
1003195.SCAT_0093(PF01135)
1003195.SCAT_5061(PF01135)
1003195.SCAT_5064(PF09924)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================