Effective results for Clostridium perfringens ATCC 13124 (eggnog40)
Summary
Number of putative secreted proteins: 63
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 25 eukaryotic-like domains, contained in 63 proteins (14 high, 49 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
195103.CPF_1489 | (PF08305) (PF13402) (PF16403) (PF00754) | ER | |||
195103.CPF_1073 | (PF08305) (PF13402) (PF16403) (PF00754) | (ER) | |||
195103.CPF_1442 | PF07555 (PF00754) | ER | |||
195103.CPF_0532 | PF12135 (PF00754) | ER | |||
195103.CPF_0184 | PF07555 (PF00754) | ER; (ER) | |||
195103.CPF_1487 | PF07555 (PF00754) | ER; (ER) | |||
195103.CPF_0042 | PF00882 (PF01477) | ER | |||
195103.CPF_0285 | (PF03644) (PF00754) | ER | |||
195103.CPF_0875 | PF07555 (PF00754) | mitochondrial; (mitochondrial) | |||
195103.CPF_1614 | PF12135 (PF00754) | (ER) | |||
195103.CPF_0815 | (PF03644) (PF00754) | ER | |||
195103.CPF_1775 | (PF14566) | ER | |||
195103.CPF_0771 | (PF05738) | ER | |||
195103.CPF_0774 | (PF05738) | ER; (ER) | |||
195103.CPF_2686 | (PF00163) | mitochondrial | |||
195103.CPF_1221 | (PF08305) | (ER) | |||
195103.CPF_0147 | (PF05738) | ER | |||
195103.CPF_0146 | (PF05738) | ER | |||
195103.CPF_1301 | (PF00754) | ER | |||
195103.CPF_1472 | (PF00754) | ER | |||
195103.CPF_1087 | (PF16403) | ER | |||
195103.CPF_2129 | (PF08305) | ER | |||
195103.CPF_0859 | (PF00754) | ER | |||
195103.CPF_2130 | (PF00754) | ER | |||
195103.CPF_2922 | (PF11070) | ER | |||
195103.CPF_0471 | (PF16889) | (mitochondrial) | |||
195103.CPF_0726 | (PF01902) | (mitochondrial) | |||
195103.CPF_0123 | (PF05738) | ER | |||
195103.CPF_0122 | (PF05738) | ER | |||
195103.CPF_1299 | (PF01902) | (mitochondrial); mitochondrial | |||
195103.CPF_2668 | (PF00163) | mitochondrial | |||
195103.CPF_0681 | (PF02915) | ||||
195103.CPF_1853 | (PF06968) | ||||
195103.CPF_1795 | (PF06968) | ||||
195103.CPF_0368 | (PF02915) | ||||
195103.CPF_1893 | (PF01991) | ||||
195103.CPF_2955 | (PF02915) | ||||
195103.CPF_1851 | PF12646 | ||||
195103.CPF_0406 | (PF16889) | ||||
195103.CPF_2484 | (PF01633) | ||||
195103.CPF_2482 | (PF01633) | ||||
195103.CPF_0985 | PF13859 | ||||
195103.CPF_2775 | (PF06968) | ||||
195103.CPF_0608 | (PF01633) | ||||
195103.CPF_2590 | PF00882 | ||||
195103.CPF_1076 | (PF02915) | ||||
195103.CPF_0708 | PF00882 | ||||
195103.CPF_2637 | (PF02915) | ||||
195103.CPF_2911 | (PF12638) | ||||
195103.CPF_0077 | (PF02915) | ||||
195103.CPF_1712 | (PF00754) | ||||
195103.CPF_2359 | (PF12513) | ||||
195103.CPF_0847 | (PF02915) | ||||
195103.CPF_1538 | (PF02915) | ||||
195103.CPF_0652 | (PF00754) | ||||
195103.CPF_1636 | PF00882 | ||||
195103.CPF_0725 | PF06467 | not used | |||
195103.CPF_0013 | (PF07892) | ||||
195103.CPF_2890 | PF12646 | ||||
195103.CPF_1288 | (PF01633) | ||||
195103.CPF_0133 | (PF02915) | ||||
195103.CPF_0106 | (PF06968) | ||||
195103.CPF_2873 | (PF07892) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)