Effective results for Actinobacillus pleuropneumoniae serovar 1 str. 4074 (eggnog40)

Summary

Number of putative secreted proteins: 603
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 215 eukaryotic-like domains, contained in 603 proteins (76 high, 527 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
228399.Aple02001040(PF04561) (PF10385) (PF04565) (PF00562) (PF04563) (PF04560)
228399.appser1_18510(PF04561) (PF10385) (PF04565) (PF00562) (PF04563) (PF04560)
228399.Aple02000402(PF02875) (PF08245) (PF01225)(ER)
228399.Aple02000458(PF01336) (PF00152) (PF02938)mitochondrial
228399.Aple02001039(PF04998) (PF04983) (PF04997) (PF05000) (PF00623)
228399.appser1_280(PF02875) (PF08245) (PF01225)(ER)
228399.appser1_12670(PF01336) (PF00152) (PF02938)mitochondrial
228399.appser1_18530(PF04998) (PF04983) (PF04997) (PF00623) (PF05000)
228399.appser1_14920(PF16327) (PF01578)ER
228399.appser1_19080(PF01479) (PF00163)(mitochondrial); mitochondrial
228399.Aple02000957(PF01138) (PF03726) (PF03725) (PF00575)
228399.Aple02000802(PF16327) (PF01578)ER
228399.appser1_11640(PF16327) (PF01578)ER
228399.Aple02001430(PF16327) (PF01578)ER
228399.Aple02001243(PF01479) (PF00163)(mitochondrial); mitochondrial
228399.Aple02001410(PF03144) (PF00009)mitochondrial; (mitochondrial)
228399.appser1_6430(PF01138) (PF03726) (PF03725) (PF00575)
228399.appser1_15340(PF03222)ER
228399.appser1_13330(PF03595)ER
228399.appser1_13750(PF00939)(ER)
228399.Aple02001727(PF06250)(mitochondrial)
228399.appser1_8210(PF03788)ER
228399.appser1_14150(PF00595)ER
228399.appser1_10900PF01755ER; mitochondrial
228399.appser1_1550(PF00710)ER
228399.Aple02000131(PF00133) (PF08264) (PF13603)
228399.Aple02000719(PF04172)ER
228399.Aple02000396(PF02875) (PF08245) (PF01225)
228399.Aple02000401(PF02875) (PF08245) (PF01225)
228399.Aple02000407(PF08496)ER
228399.appser1_4810(PF00950)ER
228399.Aple02000482(PF02844) PF01071 (PF02843)
228399.Aple02001785(PF02881) (PF02978)(mitochondrial)
228399.Aple02001291(PF03595)ER
228399.Aple02001900(PF01578)ER
228399.appser1_3390(PF00849)ER
228399.Aple02002104(PF00764)ER
228399.appser1_1480(PF00950)ER
228399.appser1_4620(PF00764)ER
228399.Aple02000645(PF01715)ER
228399.Aple02000464(PF01717)(mitochondrial)
228399.Aple02000465(PF00939)ER
228399.appser1_230(PF08496)ER
228399.Aple02001728(PF06250)(mitochondrial)
228399.appser1_9390(PF00133) (PF08264) (PF13603)
228399.appser1_4520(PF00595)ER
228399.Aple02002114PF01071(mitochondrial)
228399.Aple02000985(PF01632)mitochondrial
228399.Aple02000984(PF00453)mitochondrial
228399.Aple02000077(PF03253)ER
228399.Aple02000693(PF04172)ER
228399.Aple02000692(PF03788)ER
228399.Aple02000522(PF03595)ER
228399.appser1_18730(PF16582)(mitochondrial)
228399.appser1_6050(PF14622)ER
228399.Aple02001553(PF00595)ER
228399.appser1_14410(PF00696)(mitochondrial)
228399.appser1_6020(PF06421) (PF03144) (PF00009)
228399.Aple02000833(PF16187)ER
228399.Aple02001953(PF07650)(mitochondrial)
228399.appser1_18620(PF03749)(mitochondrial)
228399.Aple02001547(PF02875) (PF08245) (PF01225)
228399.Aple02001124(PF00950)ER
228399.appser1_9230(PF03222)ER
228399.appser1_10890(PF01075)(mitochondrial)
228399.Aple02002140(PF00237)(mitochondrial)
228399.Aple02000936(PF03222)(ER)
228399.Aple02000865(PF02873)(mitochondrial)
228399.appser1_340(PF02875) (PF08245) (PF01225)
228399.appser1_13720(PF00939)(ER)
228399.appser1_2460(PF01632)mitochondrial
228399.Aple02001155(PF00950)ER
228399.appser1_18890(PF00237)(mitochondrial)
228399.Aple02001206(PF06421) (PF03144) (PF00009)
228399.Aple02002153(PF03749)(mitochondrial)
228399.appser1_11620(PF03918)ER
228399.appser1_15290(PF02875) (PF08245) (PF01225)
228399.appser1_19770(PF02873)(mitochondrial)
228399.appser1_2470(PF00453)mitochondrial
228399.Aple02001148(PF00595)ER; (ER)
228399.appser1_18410PF00687(mitochondrial)
228399.appser1_4420(PF14714)(mitochondrial); (plastid)
228399.Aple02001777(PF16582)(mitochondrial)
228399.appser1_6630(PF03222)(ER)
228399.appser1_1400(PF00595)ER; (ER)
228399.Aple02000805(PF01578)(mitochondrial)
228399.Aple02001510(PF00939)(ER)
228399.Aple02001353PF00687(mitochondrial)
228399.appser1_8420(PF04172)ER
228399.appser1_2870(PF13177)(mitochondrial)
228399.appser1_8430(PF03788)ER
228399.appser1_12730(PF01717)(mitochondrial)
228399.appser1_15320PF01071(mitochondrial)
228399.Aple02000748(PF00696)(mitochondrial)
228399.Aple02000589(PF01075)(mitochondrial)
228399.Aple02001508(PF00939)ER
228399.Aple02001432(PF03918)ER
228399.appser1_1470(PF00950)ER
228399.appser1_20080(PF16187)ER
228399.appser1_9190(PF01717)mitochondrial
228399.appser1_19110(PF00886)mitochondrial
228399.Aple02002290(PF03253)mitochondrial
228399.appser1_15130(PF01578)ER
228399.Aple02001240(PF00886)mitochondrial
228399.appser1_8220(PF04172)ER
228399.appser1_3580(PF00091)mitochondrial
228399.appser1_12910(PF02844) PF01071 (PF02843)
228399.appser1_14300(PF06250)(mitochondrial)
228399.Aple02000720(PF03788)ER
228399.Aple02001251PF00861(mitochondrial)
228399.appser1_19000PF00861(mitochondrial)
228399.appser1_14310(PF06250)(mitochondrial)
228399.appser1_290(PF02875) (PF08245) (PF01225)
228399.Aple02000110(PF01717)mitochondrial
228399.Aple02000113(PF03222)ER
228399.Aple02001887(PF13177)(mitochondrial)
228399.Aple02001397PF13518(mitochondrial)
228399.appser1_14950(PF01578)(mitochondrial)
228399.Aple02001262(PF14714)(mitochondrial); (plastid)
228399.appser1_19010PF03719 PF00333
228399.appser1_6750(PF03484) (PF03147)
228399.appser1_12400(PF01479) (PF00849)
228399.appser1_6240(PF05872)(mitochondrial)
228399.Aple02001658(PF00696)(mitochondrial)
228399.Aple02000385(PF03144) (PF00009)
228399.Aple02001074(PF01743) (PF12627)
228399.appser1_10650PF02130 PF13718
228399.appser1_3600(PF02769) (PF00586)
228399.Aple02002122PF02130 PF13718
228399.appser1_7720(PF00696)(plastid)
228399.appser1_6740(PF01409) (PF02912)
228399.appser1_18960PF00673 PF00281
228399.Aple02000392(PF00091) (PF12327)
228399.Aple02000399(PF02875) (PF08245)
228399.appser1_9510(PF00696)(mitochondrial)
228399.appser1_20030(PF01479) (PF00849)
228399.Aple02001446(PF03918)(ER)
228399.appser1_18670(PF02881) (PF02978)
228399.appser1_3090(PF00521) (PF03989)
228399.appser1_380(PF00091) (PF12327)
228399.Aple02002138(PF03947) (PF00181)
228399.Aple02002135PF00297(mitochondrial)
228399.appser1_3890(PF01479) (PF00849)
228399.Aple02000896(PF13507) (PF02769)
228399.Aple02000276(PF00521) (PF03989)
228399.Aple02000278(PF05496) (PF05491)
228399.Aple02001705(PF01479) (PF00849)
228399.Aple02001352(PF00298) (PF03946)
228399.appser1_310(PF02875) (PF08245)
228399.appser1_19040(PF00344)(ER)
228399.Aple02002101(PF01075)(mitochondrial)
228399.appser1_13760(PF00204) (PF00986)
228399.appser1_18870(PF03947) (PF00181)
228399.Aple02001847(PF00696)(plastid)
228399.Aple02000469(PF01479) (PF00849)
228399.appser1_18900PF00189 (PF07650)
228399.Aple02001113PF10063(ER)
228399.Aple02001114(PF06418)(plastid)
228399.Aple02002023(PF03144) (PF00009)
228399.Aple02002020(PF01138) (PF03725)
228399.Aple02002119(PF01075)(ER)
228399.appser1_6440(PF00521) (PF03989)
228399.Aple02000691(PF00773) (PF00575)
228399.appser1_18910PF00252(mitochondrial)
228399.appser1_8030(PF00575)(mitochondrial)
228399.appser1_680(PF03144) (PF00009)
228399.appser1_2270(PF02769) (PF00586)
228399.appser1_7470(PF09330)(plastid)
228399.appser1_2720(PF00696)(mitochondrial)
228399.appser1_2000(PF01743) (PF12627)
228399.Aple02000200(PF01479) (PF00849)
228399.Aple02000203(PF08264)(mitochondrial)
228399.Aple02000331(PF01336) (PF00152)
228399.Aple02001621(PF02824) (PF13291)
228399.appser1_8730(PF10150) (PF00575)
228399.Aple02001009(PF01029)(ER)
228399.Aple02001008(PF02769) (PF00586)
228399.appser1_8860(PF00204) (PF00986)
228399.appser1_19090(PF01000) (PF01193)
228399.appser1_21710(PF03144) (PF00009)
228399.appser1_18840PF00297(mitochondrial)
228399.Aple02000838(PF01479) (PF00849)
228399.appser1_590(PF00133) (PF08264)
228399.appser1_8720(PF01336) (PF00152)
228399.Aple02002148PF00673 PF00281
228399.Aple02002141PF00189 (PF07650)
228399.Aple02002142PF00252(mitochondrial)
228399.appser1_7320(PF01336) (PF00152)
228399.appser1_12120(PF02769) (PF00586)
228399.Aple02000956(PF00521) (PF03989)
228399.Aple02000228(PF02769) (PF00586)
228399.Aple02001977(PF10150) (PF00575)
228399.Aple02000143(PF00696)(mitochondrial)
228399.Aple02001787(PF02769) (PF00586)
228399.Aple02000761(PF02769) (PF00586)
228399.Aple02000478(PF03948) (PF01281)
228399.Aple02001365(PF10150) (PF00575)
228399.appser1_15600(PF10150) (PF00575)
228399.appser1_2260(PF01029)(ER)
228399.Aple02000371(PF00133) (PF08264)
228399.Aple02000973(PF05872)(mitochondrial)
228399.Aple02001511(PF00204) (PF00986)
228399.appser1_18400(PF00298) (PF03946)
228399.appser1_700(PF01138) (PF03725)
228399.Aple02000017(PF01649)(mitochondrial)
228399.Aple02000344(PF09330)(plastid)
228399.appser1_19020(PF00327)mitochondrial; not used
228399.appser1_14530(PF02769) (PF00586)
228399.appser1_7560PF13718 (PF05127)
228399.appser1_600(PF01687)(mitochondrial)
228399.appser1_3860(PF08264)(mitochondrial)
228399.Aple02001759(PF03484) (PF03147)
228399.Aple02001758(PF01409) (PF02912)
228399.Aple02000174(PF01743) (PF12627)
228399.Aple02000353PF13718 (PF05127)
228399.Aple02001409(PF03144) (PF00009)
228399.Aple02001249(PF00327)mitochondrial; not used
228399.Aple02001242(PF01000) (PF01193)
228399.appser1_15950(PF00773) (PF00575)
228399.appser1_4450(PF02824) (PF13291)
228399.appser1_3070(PF05496) (PF05491)
228399.appser1_12870(PF03948) (PF01281)
228399.appser1_18020(PF13507) (PF02769)
228399.appser1_6990(PF11987) (PF00009)
228399.appser1_16160(PF00133) (PF08264)
228399.Aple02000293(PF11987) (PF00009)
228399.appser1_19480(PF02824) (PF13291)
228399.appser1_16760(PF01649)(mitochondrial)
228399.Aple02001527(PF01336) (PF00152)
228399.appser1_16300(PF03918)(ER)
228399.Aple02001250PF03719 PF00333
228399.appser1_10320(PF01743) (PF12627)
228399.appser1_12780(PF01479) (PF00849)
228399.appser1_1570(PF06418)(plastid)
228399.appser1_450(PF03144) (PF00009)
228399.Aple02001737(PF00204) (PF00986)
228399.Aple02001399(PF00133) (PF08264)
228399.appser1_16790(PF03144) (PF00009)
228399.Aple02001068(PF00773) (PF00575)
228399.Aple02001260(PF02824) (PF13291)
228399.appser1_8200(PF00773) (PF00575)
228399.appser1_3430(PF01717)
228399.appser1_7000(PF02033)
228399.appser1_7910(PF13710)
228399.appser1_7590(PF00696)
228399.appser1_2410(PF02824)
228399.appser1_12530PF02367
228399.appser1_13930(PF00575)
228399.Aple02000636(PF04127)
228399.Aple02000121(PF00849)
228399.Aple02000127(PF02403)
228399.Aple02000126(PF01668)
228399.appser1_9430(PF01121)
228399.Aple02000255(PF01207)
228399.Aple02001897(PF00209)
228399.Aple02000381(PF06071)
228399.Aple02001898(PF00209)
228399.Aple02000382(PF01195)
228399.Aple02000414(PF00308)
228399.Aple02000417(PF03462)
228399.Aple02001477(PF01171)
228399.Aple02001473(PF01171)
228399.appser1_9290(PF00849)
228399.appser1_4390(PF00156)
228399.Aple02001388(PF05167)
228399.appser1_9340(PF01668)
228399.appser1_4240(PF03449)
228399.appser1_4800(PF05496)
228399.appser1_17880(PF05025)
228399.Aple02002245(PF10150)
228399.appser1_19060PF00416
228399.appser1_3420(PF00156)
228399.Aple02002120(PF01075)
228399.Aple02000375(PF01018)
228399.Aple02000376(PF05746)
228399.Aple02000373(PF08032)
228399.appser1_19670(PF00009)
228399.Aple02000135(PF01121)
228399.Aple02000879(PF00215)
228399.appser1_2770(PF00156)
228399.Aple02000240(PF00156)
228399.Aple02000244(PF00849)
228399.Aple02000247(PF05958)
228399.Aple02000248(PF00899)
228399.Aple02000623(PF04384)
228399.Aple02000626(PF05958)
228399.Aple02000625(PF05958)
228399.Aple02001710(PF01491)
228399.appser1_21670(PF01075)
228399.Aple02000405(PF01795)
228399.appser1_250(PF01795)
228399.appser1_17200(PF02410)
228399.Aple02001354(PF00466)
228399.appser1_9350(PF02403)
228399.appser1_19070PF00411
228399.Aple02002006(PF00575)
228399.Aple02002007(PF02224)
228399.Aple02002002(PF00215)
228399.appser1_14740(PF03848)
228399.Aple02002139(PF00203)
228399.Aple02002134PF00338
228399.Aple02002136(PF00573)
228399.Aple02002137PF00276
228399.appser1_16220(PF05697)
228399.appser1_18060(PF05025)
228399.Aple02000892(PF05025)
228399.appser1_6060(PF07650)
228399.appser1_12350(PF01491)
228399.appser1_19440(PF01197)
228399.appser1_20920(PF03819)
228399.Aple02001708PF01755
228399.Aple02001709PF01755
228399.Aple02001707(PF00814)
228399.appser1_21680(PF01075)
228399.Aple02001050(PF06250)
228399.appser1_10580(PF03449)
228399.appser1_5930(PF00899)
228399.appser1_10850(PF01171)
228399.appser1_3570(PF12327)
228399.appser1_12740(PF00939)
228399.Aple02002213(PF00009)
228399.appser1_7410(PF00156)
228399.appser1_1710(PF00268)
228399.appser1_12360PF01755
228399.Aple02000268(PF00899)
228399.Aple02000641(PF03819)
228399.Aple02001840(PF03819)
228399.Aple02001842(PF08245)
228399.appser1_2620(PF01075)
228399.appser1_1130(PF13710)
228399.Aple02000466(PF00939)
228399.Aple02001115(PF00710)
228399.appser1_21080(PF05958)
228399.Aple02001025(PF01075)
228399.Aple02001021(PF01207)
228399.Aple02001935(PF01016)
228399.Aple02001934(PF00829)
228399.appser1_18610(PF03749)not used
228399.Aple02001339PF10571
228399.appser1_20540(PF01142)
228399.appser1_3360(PF05958)
228399.appser1_3500(PF03462)
228399.appser1_11880PF08538
228399.appser1_3180(PF00899)
228399.appser1_10930(PF01197)
228399.appser1_7240(PF12344)
228399.appser1_11150PF00312
228399.Aple02002206(PF00156)
228399.appser1_2100(PF01075)
228399.Aple02000986(PF00707)
228399.Aple02000980(PF00849)
228399.appser1_1030(PF00849)
228399.appser1_12370PF01755
228399.appser1_13710(PF00162)
228399.appser1_1580PF10063
228399.appser1_18860PF00276
228399.Aple02000853(PF04488)
228399.Aple02000322(PF12344)
228399.Aple02001103(PF00268)
228399.Aple02001104(PF01207)
228399.Aple02001617(PF01197)
228399.Aple02001612(PF03602)
228399.appser1_21220(PF02677)
228399.appser1_19880(PF04488)
228399.Aple02001589(PF03819)
228399.appser1_5220(PF03595)
228399.appser1_16270(PF00009)
228399.appser1_5640PF10548
228399.Aple02001327(PF01142)
228399.appser1_2300(PF08032)
228399.appser1_18640(PF10576)
228399.appser1_2130(PF01207)
228399.appser1_18420(PF00466)
228399.appser1_6670PF00380
228399.Aple02000924(PF02527)
228399.Aple02000990(PF02824)
228399.appser1_12380(PF00814)
228399.Aple02000194(PF02677)
228399.appser1_13630(PF01026)
228399.Aple02000205(PF00343)
228399.appser1_18850(PF00573)
228399.appser1_18920(PF00831)
228399.Aple02000338(PF00156)
228399.Aple02001622(PF01192)
228399.Aple02001000PF13518
228399.Aple02001005(PF08032)
228399.appser1_9480(PF13541)
228399.appser1_16460(PF00152)
228399.appser1_4610(PF01075)
228399.appser1_18700(PF13541)
228399.appser1_8040(PF02224)
228399.appser1_14700(PF02881)
228399.appser1_1690(PF01207)
228399.Aple02000059(PF02410)
228399.appser1_6330(PF00889)
228399.Aple02001831(PF00814)
228399.appser1_16070(PF05167)
228399.appser1_2650(PF00696)
228399.appser1_18930PF00366
228399.Aple02000942(PF00958)
228399.Aple02000945(PF05495)
228399.Aple02000238(PF01717)
228399.Aple02001633(PF03590)
228399.Aple02000540PF01755
228399.Aple02001019(PF00209)
228399.Aple02001123(PF05496)
228399.Aple02001940(PF00156)
228399.appser1_18430(PF16320)
228399.appser1_20420PF10571
228399.appser1_14370(PF01479)
228399.appser1_18380(PF00584)
228399.appser1_11380PF01755
228399.appser1_19390(PF13177)
228399.Aple02002090(PF00595)
228399.appser1_3350(PF00899)
228399.Aple02002143(PF00831)
228399.Aple02002144PF00366
228399.Aple02002147(PF17136)
228399.Aple02002146PF00238
228399.appser1_21800PF13518not used
228399.appser1_14710(PF03602)
228399.appser1_6850(PF00814)
228399.appser1_6580(PF00958)
228399.appser1_6320(PF00318)
228399.Aple02001801(PF13710)
228399.Aple02000285(PF08459)
228399.appser1_18940PF00238
228399.Aple02001797(PF01336)
228399.Aple02000315(PF00710)
228399.Aple02001577(PF00575)
228399.Aple02001156(PF00950)
228399.appser1_160(PF00308)
228399.Aple02001200(PF06968)
228399.Aple02001208(PF14622)
228399.appser1_5940(PF05690)
228399.appser1_17750(PF02527)
228399.appser1_7990(PF00215)
228399.appser1_19140(PF01245)
228399.Aple02002086(PF01026)
228399.Aple02002151(PF10576)
228399.appser1_7190(PF00710)
228399.appser1_10970PF13518not used
228399.appser1_11020(PF00268)
228399.appser1_6620(PF03222)
228399.appser1_20980(PF04127)
228399.appser1_6550(PF05495)
228399.appser1_13530(PF00343)
228399.appser1_12220(PF01336)
228399.Aple02000140(PF13541)
228399.Aple02000145(PF10576)
228399.appser1_570(PF08032)
228399.appser1_18950(PF17136)
228399.Aple02000498(PF00165)
228399.Aple02001780(PF13541)
228399.Aple02000965(PF00696)
228399.Aple02000964(PF01765)
228399.Aple02000967(PF00889)
228399.Aple02000780(PF03602)
228399.Aple02000968(PF00318)
228399.appser1_480(PF01195)
228399.Aple02001902(PF02620)
228399.appser1_19600(PF03590)
228399.Aple02000562PF00312
228399.Aple02001145(PF06968)
228399.Aple02001141(PF00303)
228399.Aple02001142(PF00303)
228399.appser1_18880(PF00203)
228399.Aple02001367PF13518
228399.Aple02000291(PF02576)
228399.Aple02001213(PF13177)
228399.Aple02001216(PF01026)
228399.appser1_5950(PF06968)
228399.appser1_10360(PF04384)not used
228399.appser1_11900(PF05872)
228399.appser1_19280(PF05746)
228399.appser1_19350(PF01026)
228399.appser1_18180(PF00215)
228399.appser1_6940(PF03819)
228399.Aple02000872(PF03144)
228399.Aple02000020(PF00009)
228399.Aple02000808(PF00308)
228399.Aple02000370(PF01687)
228399.Aple02000978(PF03652)
228399.appser1_490(PF06071)
228399.Aple02000776(PF08211)
228399.Aple02000779(PF02881)
228399.Aple02000784(PF03848)
228399.Aple02000575(PF00268)
228399.appser1_21720(PF00009)
228399.Aple02000481(PF01250)
228399.appser1_140(PF03462)
228399.Aple02001992(PF13710)
228399.Aple02001196(PF00899)
228399.Aple02001195(PF00899)
228399.Aple02001199(PF05690)
228399.Aple02001198(PF05690)
228399.Aple02001350(PF00584)not used
228399.Aple02001355(PF16320)
228399.Aple02001426PF13518
228399.appser1_18980PF00410
228399.Aple02001223(PF05746)
228399.appser1_15930(PF01479)
228399.appser1_3010(PF01026)
228399.appser1_3300(PF01207)
228399.appser1_14670(PF08211)
228399.Aple02002190(PF00764)not used
228399.Aple02002194(PF00156)
228399.appser1_7040(PF13500)
228399.appser1_7550PF02130
228399.appser1_6970(PF02576)
228399.Aple02000019(PF01029)
228399.appser1_2450(PF00707)
228399.appser1_550(PF01018)
228399.appser1_21280(PF01016)
228399.appser1_14980(PF00308)
228399.Aple02001763PF13518
228399.Aple02001764(PF13500)
228399.Aple02000909(PF05025)
228399.Aple02000743(PF01479)
228399.Aple02001690PF02367
228399.Aple02000588(PF01197)
228399.Aple02000581PF13518not used
228399.Aple02001507(PF00162)
228399.Aple02000586PF13518
228399.appser1_16580(PF01171)
228399.appser1_20880(PF01715)
228399.Aple02001985(PF05958)
228399.Aple02001280(PF03449)
228399.appser1_18990PF00347
228399.Aple02001238(PF01746)
228399.Aple02001239(PF01782)
228399.Aple02001237(PF01245)
228399.appser1_21320(PF00156)
228399.appser1_10520(PF13500)
228399.appser1_2990(PF08459)
228399.Aple02002058(PF03222)
228399.appser1_12900(PF01250)
228399.appser1_6780(PF13500)
228399.appser1_19490(PF01192)
228399.appser1_2510(PF00849)
228399.appser1_6960(PF08245)
228399.appser1_540(PF05746)
228399.appser1_6360(PF01765)
228399.appser1_12300(PF05958)
228399.appser1_4650(PF00156)
228399.Aple02001751PF00380
228399.Aple02000175PF13518
228399.Aple02000914PF13518
228399.Aple02000590PF01755
228399.Aple02000591(PF01075)
228399.Aple02000356(PF00696)
228399.Aple02000352PF02130
228399.appser1_1350(PF00303)
228399.Aple02000230(PF03462)
228399.Aple02001404(PF05697)
228399.appser1_21700PF00177
228399.Aple02001248PF00828
228399.Aple02001247(PF00344)
228399.Aple02001245PF00416
228399.Aple02001244PF00411
228399.Aple02001241(PF01196)
228399.appser1_17400(PF03253)
228399.appser1_19100(PF01196)
228399.appser1_19030PF00828
228399.Aple02002041(PF00849)
228399.Aple02002288(PF00950)not used
228399.Aple02002285PF02367
228399.appser1_15120(PF02620)
228399.appser1_6350(PF00696)
228399.Aple02000295(PF01509)
228399.Aple02000294(PF02033)
228399.Aple02000292(PF13184)
228399.Aple02000298(PF13500)
228399.Aple02000437(PF06250)
228399.appser1_16780(PF01029)
228399.Aple02001411PF00177
228399.Aple02001252PF00347
228399.Aple02001253PF00410
228399.appser1_19130(PF01746)
228399.Aple02002075(PF00343)
228399.appser1_7010(PF01509)
228399.appser1_2880(PF00156)
228399.appser1_15150(PF00209)
228399.appser1_3840(PF00343)
228399.appser1_2530(PF03652)
228399.appser1_6980(PF13184)
228399.appser1_2150(PF00209)
228399.Aple02000608(PF13500)
228399.Aple02000602(PF03449)
228399.Aple02000284(PF01026)
228399.Aple02000937(PF03222)
228399.appser1_1370(PF06968)
228399.appser1_13120(PF04664)
228399.appser1_18830PF00338
228399.Aple02001647(PF00696)
228399.Aple02001644(PF01075)
228399.Aple02001886(PF00156)
228399.Aple02001462(PF00152)
228399.appser1_21270(PF00829)
228399.appser1_9530(PF10576)
228399.Aple02001066(PF01479)
228399.Aple02001264(PF00156)
228399.appser1_19120(PF01782)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================