Effective results for Dictyoglomus thermophilum H-6-12 (eggnog40)

Summary

Number of putative secreted proteins: 16
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 15 eukaryotic-like domains, contained in 16 proteins (4 high, 12 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
309799.DICTH_1245(PF03948) (PF01281)(ER); (mitochondrial)
309799.DICTH_1472(PF03266)(mitochondrial)
309799.DICTH_1537(PF01789)ER
309799.DICTH_1991(PF09825)ER; (ER)
309799.DICTH_1542PF03351ER
309799.DICTH_1838PF07217ER
309799.DICTH_1227(PF14330)(mitochondrial)
309799.DICTH_0094PF15508ER
309799.DICTH_0331(PF03948) (PF01281)
309799.DICTH_1229(PF05034) (PF07476)
309799.DICTH_0340(PF00731)
309799.DICTH_0125PF16575
309799.DICTH_1435(PF00731)
309799.DICTH_0001(PF00731)
309799.DICTH_1491(PF14792)
309799.DICTH_1693(PF07998)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================