Metamenu

Effective results for Bacillus sp. NRRL B-14911 (eggnog40)

Summary

Number of putative secreted proteins: 90
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 25 eukaryotic-like domains, contained in 90 proteins (1 high, 89 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
313627.B14911_18430(PF02535)(ER)
313627.B14911_21883(PF01476)ER
313627.B14911_04059(PF01476)ER
313627.B14911_10277(PF13307)mitochondrial; (mitochondrial)
313627.B14911_09372(PF02681)ER
313627.B14911_28140(PF01476)ER
313627.B14911_22332(PF13529)ER
313627.B14911_08807(PF01476)ER
313627.B14911_27995(PF01476)ER
313627.B14911_03104(PF06280)(ER); ER
313627.B14911_03109(PF01520)ER
313627.B14911_04414(PF13529)ER
313627.B14911_14212(PF01476)mitochondrial
313627.B14911_25715(PF01476)ER
313627.B14911_06873(PF02681)ER
313627.B14911_17540(PF02535)mitochondrial
313627.B14911_03054(PF06280)ER
313627.B14911_25615(PF02535)ER
313627.B14911_01199(PF01520)ER
313627.B14911_24150(PF13529)ER
313627.B14911_09222(PF01476)ER
313627.B14911_01605(PF01520)ER
313627.B14911_09172(PF01520) (PF01476)
313627.B14911_01740(PF01192)(plastid)
313627.B14911_22117(PF02535)(plastid)
313627.B14911_04259(PF01476)(plastid)
313627.B14911_20165(PF01520) (PF01476)
313627.B14911_06491(PF01476)(mitochondrial)
313627.B14911_10232(PF01476)plastid
313627.B14911_24220(PF14328)
313627.B14911_19640(PF08892)
313627.B14911_04859(PF01520)
313627.B14911_28200(PF01476)
313627.B14911_07578(PF13307)not used
313627.B14911_21333(PF01432)
313627.B14911_11012(PF13307)
313627.B14911_20503(PF12787)
313627.B14911_16670(PF01432)
313627.B14911_16675(PF03575)
313627.B14911_02974(PF01476)
313627.B14911_07003(PF13307)
313627.B14911_23612(PF08378)
313627.B14911_06738(PF01432)
313627.B14911_21678(PF16242)
313627.B14911_06236(PF01476)
313627.B14911_23655(PF12787)
313627.B14911_15511(PF01476)
313627.B14911_07940(PF01476)
313627.B14911_02784(PF08378)
313627.B14911_05264(PF13529)
313627.B14911_22317(PF01476)
313627.B14911_25450(PF03575)
313627.B14911_25000(PF01432)
313627.B14911_28605(PF01520)
313627.B14911_27060(PF08892)
313627.B14911_13507(PF03575)
313627.B14911_11677(PF08378)
313627.B14911_08887(PF01476)
313627.B14911_05054(PF08378)
313627.B14911_04869(PF01520)
313627.B14911_01635PF00249
313627.B14911_11407(PF13921)
313627.B14911_19960(PF03851)
313627.B14911_23047(PF12787)
313627.B14911_16665(PF16242)
313627.B14911_23457(PF01432)
313627.B14911_18725(PF01476)
313627.B14911_28525(PF12638)
313627.B14911_27185(PF13529)
313627.B14911_25925(PF01432)
313627.B14911_20160(PF01520)
313627.B14911_00159(PF08378)
313627.B14911_24295(PF12606)
313627.B14911_17505(PF13911)
313627.B14911_02544(PF03851)
313627.B14911_10907(PF13921)
313627.B14911_28130(PF01432)
313627.B14911_17140(PF16242)
313627.B14911_19295(PF08378)
313627.B14911_07178(PF13307)
313627.B14911_10217(PF03630)
313627.B14911_11517(PF02873)
313627.B14911_04954(PF05225)
313627.B14911_03114(PF01520)
313627.B14911_09727(PF01432)
313627.B14911_10472(PF04098)
313627.B14911_03779(PF08378)
313627.B14911_26700(PF02873)
313627.B14911_00935(PF01192)
313627.B14911_21723(PF03575)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================