Effective results for Beutenbergia cavernae DSM 12333 (eggnog40)

Summary

Number of putative secreted proteins: 240
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 26 eukaryotic-like domains, contained in 240 proteins (2 high, 238 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
471853.Bcav_1577(PF01408) (PF02894)(mitochondrial)
471853.Bcav_0174(PF08124) (PF02884)ER
471853.Bcav_4062(PF08124) (PF02884)(ER)
471853.Bcav_1146(PF01408) (PF02894)(ER); (mitochondrial)
471853.Bcav_3364(PF01408) (PF02894)(ER)
471853.Bcav_0600(PF01408) (PF02894)mitochondrial
471853.Bcav_4060(PF01408)ER; (mitochondrial)
471853.Bcav_2704(PF13810)(ER)
471853.Bcav_2703(PF13416)ER; (ER)
471853.Bcav_3388(PF13416)(mitochondrial)
471853.Bcav_3941(PF13416)ER; (ER)
471853.Bcav_0627(PF11721)ER
471853.Bcav_3712(PF13416)ER
471853.Bcav_0434(PF13416)ER
471853.Bcav_0557(PF01408)ER; (mitochondrial)
471853.Bcav_0894(PF13416)(mitochondrial)
471853.Bcav_0892(PF13377)(mitochondrial); (plastid)
471853.Bcav_1707(PF13810)mitochondrial; (mitochondrial)
471853.Bcav_0178(PF13416)mitochondrial
471853.Bcav_2551(PF13416)ER
471853.Bcav_3608(PF13377)(mitochondrial)
471853.Bcav_0188(PF01408)ER
471853.Bcav_1296(PF13416)ER; (ER)
471853.Bcav_1295(PF13377)mitochondrial
471853.Bcav_1294(PF16655)(mitochondrial)
471853.Bcav_2837(PF13416)ER; (ER)
471853.Bcav_3986(PF16655)mitochondrial
471853.Bcav_3988(PF13416)mitochondrial
471853.Bcav_1485(PF13416)ER
471853.Bcav_2846(PF13416)ER
471853.Bcav_3794(PF01408)ER
471853.Bcav_3793(PF13416)(ER)
471853.Bcav_0014(PF13377)(ER)
471853.Bcav_0306(PF13416)(ER)
471853.Bcav_1781(PF13416)ER
471853.Bcav_1658(PF01408) (PF02894)(mitochondrial)
471853.Bcav_2274(PF13416)ER
471853.Bcav_2275(PF13377)(mitochondrial)
471853.Bcav_2896(PF16655)(mitochondrial)
471853.Bcav_0793(PF13416)(mitochondrial)
471853.Bcav_1468(PF13416)mitochondrial
471853.Bcav_1467(PF01408)ER
471853.Bcav_1680(PF13416)mitochondrial
471853.Bcav_2867(PF13377)(mitochondrial); plastid
471853.Bcav_3077(PF13416)ER
471853.Bcav_1698(PF13416)(mitochondrial)
471853.Bcav_0641(PF11070)ER
471853.Bcav_1502(PF16655)mitochondrial; (mitochondrial)
471853.Bcav_1501(PF12708)(mitochondrial)
471853.Bcav_0800(PF13377)(mitochondrial)
471853.Bcav_0803(PF01408) (PF02894)(mitochondrial)
471853.Bcav_0806(PF13416)(mitochondrial)
471853.Bcav_0808(PF01408)(ER)
471853.Bcav_1534(PF13416)(ER); ER
471853.Bcav_1530(PF13653)ER
471853.Bcav_3572(PF13416)ER
471853.Bcav_0271(PF01872)(ER)
471853.Bcav_0276(PF13416)ER
471853.Bcav_1183(PF01408)mitochondrial; (mitochondrial)
471853.Bcav_1454(PF13416)ER; (mitochondrial)
471853.Bcav_1522(PF13416)ER
471853.Bcav_1527(PF13416)(mitochondrial); mitochondrial
471853.Bcav_3365(PF01408)mitochondrial; (mitochondrial)
471853.Bcav_3360(PF13377)(mitochondrial)
471853.Bcav_1955(PF13416)ER
471853.Bcav_1956(PF13377)(mitochondrial); (plastid)
471853.Bcav_2977(PF13416)ER
471853.Bcav_1543(PF13416)(ER)
471853.Bcav_0055(PF13377)(mitochondrial)
471853.Bcav_1706(PF11175)(mitochondrial)
471853.Bcav_1354(PF01408) (PF02894)
471853.Bcav_3181(PF13377)(plastid)
471853.Bcav_0192(PF13416)(ER)
471853.Bcav_4185(PF01408) (PF02894)
471853.Bcav_3315(PF01408) (PF02894)
471853.Bcav_0036(PF13377)(ER)
471853.Bcav_1322(PF13377)(plastid)
471853.Bcav_3275(PF13377)(plastid)
471853.Bcav_3075(PF13377)(plastid)
471853.Bcav_2078(PF01636)plastid
471853.Bcav_4191(PF01408) (PF02894)
471853.Bcav_3896(PF13377)(mitochondrial)
471853.Bcav_1317(PF13377)(plastid)
471853.Bcav_1866(PF12708)(mitochondrial)
471853.Bcav_0302(PF01408) (PF02894)
471853.Bcav_0309(PF13377)plastid
471853.Bcav_1659(PF01408) (PF02894)
471853.Bcav_0790(PF01408) (PF02894)
471853.Bcav_1660(PF01408) (PF02894)
471853.Bcav_2262(PF13377)(plastid)
471853.Bcav_2649(PF14721)(ER)
471853.Bcav_1474(PF13377)(plastid)
471853.Bcav_1508(PF13416)(ER)
471853.Bcav_0805(PF01408) (PF02894)
471853.Bcav_3349(PF01408) (PF02894)
471853.Bcav_3348(PF01408) (PF02894)
471853.Bcav_1228(PF01636)(ER)
471853.Bcav_3571(PF13377)(plastid)
471853.Bcav_0594(PF01408) (PF02894)
471853.Bcav_0593(PF13377)(plastid)
471853.Bcav_0731(PF01408) (PF02894)
471853.Bcav_2604(PF13377)(mitochondrial)
471853.Bcav_3772(PF01408) (PF02894)
471853.Bcav_3000(PF13416)(mitochondrial)
471853.Bcav_2569(PF01230)
471853.Bcav_3761(PF01872)
471853.Bcav_3763(PF03795)
471853.Bcav_1948(PF01636)
471853.Bcav_3169(PF01636)
471853.Bcav_3384(PF13377)
471853.Bcav_0446(PF01872)
471853.Bcav_0056(PF13377)
471853.Bcav_3710(PF01636)
471853.Bcav_1970(PF01230)
471853.Bcav_1578(PF13377)
471853.Bcav_2954(PF01636)
471853.Bcav_3531(PF01636)
471853.Bcav_0943(PF16875)
471853.Bcav_3444(PF12708)
471853.Bcav_3446(PF12831)
471853.Bcav_0432(PF12708)
471853.Bcav_3841(PF01872)
471853.Bcav_0556(PF13416)
471853.Bcav_0541(PF01872)
471853.Bcav_0383(PF03795)
471853.Bcav_0098PF07460
471853.Bcav_1702(PF03795)
471853.Bcav_2819(PF13416)
471853.Bcav_2816(PF16875)
471853.Bcav_2722(PF12831)
471853.Bcav_2723(PF13377)
471853.Bcav_2720(PF13377)
471853.Bcav_2721(PF01636)
471853.Bcav_0957(PF11721)
471853.Bcav_3452(PF13377)
471853.Bcav_3455(PF03795)
471853.Bcav_0558(PF13377)
471853.Bcav_1357(PF01636)
471853.Bcav_2027(PF01872)
471853.Bcav_4090(PF13603)
471853.Bcav_4097(PF01636)
471853.Bcav_4076(PF03795)
471853.Bcav_1299(PF12831)
471853.Bcav_1769(PF01872)
471853.Bcav_2122(PF16655)
471853.Bcav_3618(PF12708)
471853.Bcav_2836(PF12831)
471853.Bcav_2900(PF01636)
471853.Bcav_4084(PF03795)
471853.Bcav_4061(PF13377)
471853.Bcav_0193(PF13377)
471853.Bcav_0194(PF12831)
471853.Bcav_1801(PF01636)
471853.Bcav_3262PF08213not used
471853.Bcav_3083(PF01230)
471853.Bcav_3085(PF01636)
471853.Bcav_3887(PF01636)
471853.Bcav_3313(PF13377)
471853.Bcav_3319(PF13377)
471853.Bcav_0327(PF01636)
471853.Bcav_4056(PF05448)
471853.Bcav_1104(PF01636)
471853.Bcav_1631(PF13810)
471853.Bcav_3675(PF13416)
471853.Bcav_3674(PF12831)
471853.Bcav_1818(PF01872)
471853.Bcav_1817(PF01872)
471853.Bcav_2210(PF03795)
471853.Bcav_3899(PF13416)
471853.Bcav_0207(PF01872)
471853.Bcav_0204(PF01872)
471853.Bcav_4040(PF13416)
471853.Bcav_1488(PF01636)
471853.Bcav_1865(PF12708)
471853.Bcav_1867(PF12831)
471853.Bcav_2844(PF13377)
471853.Bcav_2841(PF13377)
471853.Bcav_2069(PF01230)
471853.Bcav_0015(PF13416)
471853.Bcav_0010(PF03795)
471853.Bcav_0658(PF01408)
471853.Bcav_2090(PF03795)
471853.Bcav_1780(PF13377)
471853.Bcav_1499(PF01230)
471853.Bcav_2877(PF13377)
471853.Bcav_0825(PF13377)
471853.Bcav_0794(PF13377)
471853.Bcav_0317(PF12831)
471853.Bcav_1066(PF01636)
471853.Bcav_2267(PF01408)
471853.Bcav_3922(PF01408)
471853.Bcav_2089(PF03795)
471853.Bcav_2088(PF01872)
471853.Bcav_2883(PF01872)
471853.Bcav_3356(PF13377)
471853.Bcav_0079(PF01636)
471853.Bcav_0074(PF03795)
471853.Bcav_0073(PF01872)
471853.Bcav_0105(PF01636)
471853.Bcav_1673(PF12899)
471853.Bcav_1697(PF11175)
471853.Bcav_1696(PF13377)
471853.Bcav_2256(PF03795)
471853.Bcav_3696(PF01636)
471853.Bcav_1535(PF13377)
471853.Bcav_1531(PF12831)
471853.Bcav_3979(PF13377)
471853.Bcav_0585(PF01872)
471853.Bcav_0476(PF01408)
471853.Bcav_3800(PF13810)
471853.Bcav_3806(PF01636)
471853.Bcav_0121(PF01408)
471853.Bcav_0058(PF13416)
471853.Bcav_1058(PF05448)
471853.Bcav_1980(PF01230)
471853.Bcav_2180(PF03795)
471853.Bcav_1520(PF13377)
471853.Bcav_3363(PF01408)
471853.Bcav_0599(PF05448)
471853.Bcav_0918(PF13377)
471853.Bcav_0913(PF13377)
471853.Bcav_0280(PF13377)
471853.Bcav_4113(PF14494)
471853.Bcav_4112(PF03795)
471853.Bcav_0130(PF16875)
471853.Bcav_1730(PF13603)
471853.Bcav_1734(PF01872)
471853.Bcav_1952(PF03795)
471853.Bcav_1553(PF03795)
471853.Bcav_2603(PF13416)
471853.Bcav_2608(PF01636)
471853.Bcav_2772(PF01636)
471853.Bcav_3399(PF13377)
471853.Bcav_3396(PF01408)
471853.Bcav_2648(PF01636)
471853.Bcav_3956(PF01636)
471853.Bcav_4124(PF01872)
471853.Bcav_4128(PF03795)
471853.Bcav_1437(PF13416)
471853.Bcav_1433(PF13810)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================