Effective results for Streptococcus equinus ATCC 9812 (eggnog40)

Summary

Number of putative secreted proteins: 29
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 29 proteins (1 high, 28 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525379.HMPREF0819_1221(PF05257)(mitochondrial)
525379.HMPREF0819_0083(PF01610)(ER)
525379.HMPREF0819_0308PF02916ER
525379.HMPREF0819_1638(PF01610)(ER)
525379.HMPREF0819_0822(PF03714)(mitochondrial)
525379.HMPREF0819_0526(PF05257)ER
525379.HMPREF0819_0946(PF06100)(mitochondrial)
525379.HMPREF0819_0158(PF06280)(mitochondrial)
525379.HMPREF0819_0723(PF05257)
525379.HMPREF0819_1789(PF01610)not used
525379.HMPREF0819_0184(PF03714)
525379.HMPREF0819_0157(PF06280)
525379.HMPREF0819_0326(PF01610)not used
525379.HMPREF0819_1119(PF10544)
525379.HMPREF0819_0643(PF01610)not used
525379.HMPREF0819_0906(PF01610)not used
525379.HMPREF0819_1768(PF05257)not used
525379.HMPREF0819_1286(PF05495)
525379.HMPREF0819_0487(PF10544)
525379.HMPREF0819_0750(PF00343)
525379.HMPREF0819_0947(PF06100)
525379.HMPREF0819_0945(PF06100)
525379.HMPREF0819_0443(PF10544)
525379.HMPREF0819_0525(PF01610)not used
525379.HMPREF0819_0608(PF01610)
525379.HMPREF0819_0190(PF00343)
525379.HMPREF0819_0191(PF00343)
525379.HMPREF0819_0192(PF00343)
525379.HMPREF0819_0193(PF00343)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================