Effective results for Thermanaerovibrio acidaminovorans DSM 6589 (eggnog40)

Summary

Number of putative secreted proteins: 24
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 24 proteins (0 high, 24 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525903.Taci_0258(PF00871)(mitochondrial)
525903.Taci_0860(PF01813)(mitochondrial)
525903.Taci_0522(PF01992)(ER)
525903.Taci_0524(PF01813)(mitochondrial)
525903.Taci_1260(PF00209)ER
525903.Taci_0381(PF00209)ER; (ER)
525903.Taci_1391(PF00209)(ER)
525903.Taci_0454(PF00871)(plastid)
525903.Taci_0521(PF01496)(ER)
525903.Taci_0915(PF07837) (PF02971)
525903.Taci_0518(PF01991)
525903.Taci_0519(PF01990)
525903.Taci_1256(PF00209)
525903.Taci_1257(PF14336)
525903.Taci_1105(PF00871)
525903.Taci_0855(PF01991)
525903.Taci_0857(PF01990)
525903.Taci_0853(PF01496)
525903.Taci_0858(PF16886)
525903.Taci_0517(PF16886)
525903.Taci_0722(PF00209)
525903.Taci_0590(PF00871)
525903.Taci_0591(PF00871)
525903.Taci_0856(PF01992)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================