Effective results for Mesorhizobium opportunistum WSM2075 (eggnog40)

Summary

Number of putative secreted proteins: 950
- Predicted by EffectiveT3: 162 (high confidence), 310 (low confidence)
- Predicted by EffectiveCCBD: 38 within, 17 before, 44 behind expected region 25..70aa
- Predicted by T4SEpre: 96
- Predicted by EffectiveELD: 54 eukaryotic-like domains, contained in 356 proteins (5 high, 351 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type III), Type IV, (Type VI)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
536019.Mesop_6323(PF08669) (PF01571) (PF16350)(ER)
536019.Mesop_3464(PF08669) (PF01571) (PF16350)ER
536019.Mesop_3820(PF08669) (PF01571) (PF16350)(mitochondrial)
536019.Mesop_2336++(PF09587)(mitochondrial)
536019.Mesop_3949(PF14295) (PF00656) (PF00024)mitochondrial
536019.Mesop_5916(PF08669) (PF01571) (PF16350)(ER)
536019.Mesop_3782(PF08669) (PF01571) (PF16350)(ER)
536019.Mesop_0158(PF08669) (PF01571) (PF16350)(ER)
536019.Mesop_3570(PF08669) (PF01571) (PF16350)ER
536019.Mesop_3876(PF08669) (PF01571) (PF16350)(ER)
536019.Mesop_0585+(PF02653)ER
536019.Mesop_0160+(PF01633)(ER)
536019.Mesop_1747+(PF09587)ER
536019.Mesop_1103+(PF13407)ER
536019.Mesop_2663(>)(PF02653)(ER); plastid
536019.Mesop_2660+(PF13407)ER
536019.Mesop_0498+(PF02653)ER
536019.Mesop_1993+(>)(mitochondrial); plastid
536019.Mesop_1860(PF08669) (PF01571)(mitochondrial)
536019.Mesop_4020(PF13407)ER; mitochondrial
536019.Mesop_6308(<)ER
536019.Mesop_1843(<)ER
536019.Mesop_4495(PF02653)ER
536019.Mesop_4494(PF02653)mitochondrial
536019.Mesop_1678(PF13407)ER
536019.Mesop_1679+(>)(PF02653)
536019.Mesop_0674(PF02653)ER
536019.Mesop_5757(PF02653)ER
536019.Mesop_5756(PF13407)ER
536019.Mesop_3693(PF06455)ER
536019.Mesop_6321+mitochondrial
536019.Mesop_5982(PF08402)(mitochondrial)
536019.Mesop_0586(PF02653)ER
536019.Mesop_0053+(mitochondrial); (plastid)
536019.Mesop_0056+ER
536019.Mesop_2753+ER
536019.Mesop_3823(PF08669) (PF01571) (PF16350)
536019.Mesop_0260PF03452(mitochondrial)
536019.Mesop_2285(PF00112)mitochondrial
536019.Mesop_2773(PF02653)ER
536019.Mesop_2774(PF02653)mitochondrial
536019.Mesop_2776(PF13407)ER
536019.Mesop_2368(PF04752)(ER); (mitochondrial)
536019.Mesop_5719+ER
536019.Mesop_1151(>)ER
536019.Mesop_4012(PF02653)(mitochondrial); plastid
536019.Mesop_4010(PF13407)ER
536019.Mesop_5260PF06482ER
536019.Mesop_5869(PF02653)ER
536019.Mesop_4678(PF04828)(mitochondrial)
536019.Mesop_5901(PF08402)(mitochondrial)
536019.Mesop_2227+ER; (ER)
536019.Mesop_3831(>)ER
536019.Mesop_3064(PF02653)ER
536019.Mesop_3050(PF13407)ER
536019.Mesop_3616+ER
536019.Mesop_1751(PF00656)mitochondrial
536019.Mesop_0502(PF13407)ER
536019.Mesop_0507(PF02746)ER
536019.Mesop_0501(PF13407)ER
536019.Mesop_4693+(mitochondrial)
536019.Mesop_4692+mitochondrial; (mitochondrial)
536019.Mesop_1324+ER
536019.Mesop_2676(PF02653)(ER); (plastid)
536019.Mesop_2679(PF02653)ER
536019.Mesop_0933(PF01321)(mitochondrial)
536019.Mesop_0522(PF13407)ER
536019.Mesop_0520(PF02653)ER
536019.Mesop_4458+ER; (ER)
536019.Mesop_6476(+)+(mitochondrial); (plastid)
536019.Mesop_1492(PF08402)(mitochondrial)
536019.Mesop_4159+ER
536019.Mesop_5879(PF02653)ER
536019.Mesop_2521(PF02653)ER
536019.Mesop_2650(PF04191)ER
536019.Mesop_3404(PF13407)ER
536019.Mesop_2884(PF13407)ER
536019.Mesop_6599(PF02653)ER
536019.Mesop_1516+ER; (ER)
536019.Mesop_6597(PF13407)ER
536019.Mesop_1474+ER
536019.Mesop_6623(+)(PF13407)mitochondrial; (mitochondrial)
536019.Mesop_1106(PF02653)ER
536019.Mesop_1105(PF02653)(ER); (plastid)
536019.Mesop_2403(>)(ER)
536019.Mesop_5187+mitochondrial
536019.Mesop_1533(PF13407)ER
536019.Mesop_6182+ER
536019.Mesop_0722+ER; (ER)
536019.Mesop_4774+ER
536019.Mesop_3564(PF06736)ER; (ER)
536019.Mesop_5935+(mitochondrial); (plastid)
536019.Mesop_5878(PF02653)ER
536019.Mesop_3840(PF08669) (PF01571) (PF16350)
536019.Mesop_2003+(mitochondrial); plastid
536019.Mesop_2140(PF02653)ER; (ER)
536019.Mesop_1387(PF07931)(mitochondrial)
536019.Mesop_5061+ER
536019.Mesop_5700(PF13407)ER
536019.Mesop_6006(PF08402)(mitochondrial)
536019.Mesop_6000(PF13407)ER
536019.Mesop_1835(PF02653)ER
536019.Mesop_3291(PF02653)ER
536019.Mesop_3293(PF13407)ER
536019.Mesop_5628+mitochondrial
536019.Mesop_1629+(mitochondrial)
536019.Mesop_2820(PF02653)(ER)
536019.Mesop_3883(<)+(PF08695)
536019.Mesop_3271(PF13407)ER
536019.Mesop_4262+ER; (mitochondrial)
536019.Mesop_5743(PF08669) (PF01571)(plastid)
536019.Mesop_5221+mitochondrial
536019.Mesop_4852(PF02653)ER
536019.Mesop_4851(PF13407)ER
536019.Mesop_1643(PF00656)ER
536019.Mesop_6541(>)(ER); ER
536019.Mesop_1784+ER
536019.Mesop_2867(PF08402)(ER)
536019.Mesop_2860(PF13407)ER
536019.Mesop_4018(PF02653)ER
536019.Mesop_5766(PF02653)mitochondrial; (mitochondrial)
536019.Mesop_5764(PF13407)ER
536019.Mesop_5768(PF13407)ER
536019.Mesop_3355+mitochondrial
536019.Mesop_4483(PF06472)mitochondrial
536019.Mesop_2747(PF05990)ER
536019.Mesop_0274(PF02653)ER
536019.Mesop_4560(PF05368)(mitochondrial)
536019.Mesop_1231(>)ER
536019.Mesop_3004+mitochondrial
536019.Mesop_5235+ER
536019.Mesop_0854(PF06764)ER
536019.Mesop_1727(PF13407)(mitochondrial); mitochondrial
536019.Mesop_1725(PF02653)ER
536019.Mesop_5393(PF13407)ER
536019.Mesop_3501(PF04191)ER
536019.Mesop_4420(>)ER
536019.Mesop_3454(PF00024)ER
536019.Mesop_3044+(ER); (mitochondrial)
536019.Mesop_1359(PF05368)(mitochondrial)
536019.Mesop_0323(PF02653)(mitochondrial)
536019.Mesop_4056(PF04191)ER
536019.Mesop_2215+(ER); ER
536019.Mesop_0514(PF13407)ER
536019.Mesop_5157(>)ER
536019.Mesop_5899(>)ER
536019.Mesop_5894(PF02653)ER
536019.Mesop_5895(PF02653)mitochondrial
536019.Mesop_5892(PF13407)ER
536019.Mesop_1314+ER
536019.Mesop_0309(PF00656)ER
536019.Mesop_0308+(ER)
536019.Mesop_2661(PF02653)(ER)
536019.Mesop_6468(PF00656)mitochondrial; (mitochondrial)
536019.Mesop_1128(PF02653)ER
536019.Mesop_1129(PF02653)(ER)
536019.Mesop_2788+(mitochondrial)
536019.Mesop_3431(PF13407)ER
536019.Mesop_3439(PF13407)ER
536019.Mesop_4945PF05686mitochondrial; (mitochondrial)
536019.Mesop_4946PF05686mitochondrial
536019.Mesop_0495+ER
536019.Mesop_4169(PF02653)mitochondrial; (mitochondrial)
536019.Mesop_4168(PF02653)ER
536019.Mesop_4434(PF00656)ER
536019.Mesop_5970(PF02653)ER
536019.Mesop_1697(PF08402)(mitochondrial)
536019.Mesop_5969(PF02653)ER
536019.Mesop_1447+ER
536019.Mesop_1444(PF13407)ER
536019.Mesop_0473(PF13407)(mitochondrial)
536019.Mesop_0475(PF13407)ER
536019.Mesop_0282(PF02653)ER
536019.Mesop_0286(PF02746)(ER)
536019.Mesop_0921(PF04191)(mitochondrial)
536019.Mesop_5868(PF02653)(ER)
536019.Mesop_1090+ER
536019.Mesop_0153(+)(PF08402)(mitochondrial)
536019.Mesop_4920+ER
536019.Mesop_0434+(ER)
536019.Mesop_4720(PF05990)ER
536019.Mesop_5090+(mitochondrial); (plastid)
536019.Mesop_5093(PF13407)ER; (mitochondrial)
536019.Mesop_3140(PF13407)ER
536019.Mesop_3142(PF02653)(ER)
536019.Mesop_5847+(PF02653)(plastid)
536019.Mesop_3704(<)ER
536019.Mesop_3907(PF00656)(mitochondrial)
536019.Mesop_3576(PF13407)ER
536019.Mesop_0882+mitochondrial; (mitochondrial)
536019.Mesop_4704+ER
536019.Mesop_5618(PF00656)ER
536019.Mesop_1002(PF06764)ER
536019.Mesop_4886(PF16387)ER
536019.Mesop_1615(PF08402)(mitochondrial)
536019.Mesop_4063+ER
536019.Mesop_4276(PF02653)ER; (ER)
536019.Mesop_4441+(mitochondrial); (plastid)
536019.Mesop_4861(PF08402)(mitochondrial)
536019.Mesop_3415(PF13407)ER
536019.Mesop_6571+mitochondrial; plastid
536019.Mesop_2116+(mitochondrial); (plastid)
536019.Mesop_5492+mitochondrial
536019.Mesop_3307(PF05368)mitochondrial; (mitochondrial)
536019.Mesop_0017(>)(mitochondrial)
536019.Mesop_4674+(plastid)
536019.Mesop_5771(PF02653)(plastid)
536019.Mesop_3327+(ER)
536019.Mesop_3225(PF05368)plastid
536019.Mesop_3177+(PF13480)
536019.Mesop_0671+(plastid)
536019.Mesop_0247(+)mitochondrial
536019.Mesop_4001+(plastid)
536019.Mesop_3344(+)(ER); (plastid)
536019.Mesop_5988(+)mitochondrial; (mitochondrial)
536019.Mesop_0266(PF08669) (PF01571)
536019.Mesop_5222(>)(mitochondrial)
536019.Mesop_0861+(PF00112)
536019.Mesop_0638+plastid
536019.Mesop_1715+(PF08975)
536019.Mesop_1712+(plastid)
536019.Mesop_6269(PF05034) (PF07476)
536019.Mesop_1776+(mitochondrial)
536019.Mesop_4676(PF05368)(plastid)
536019.Mesop_3068(>)(mitochondrial)
536019.Mesop_1111+(PF05899)
536019.Mesop_0698(PF02371)(plastid)
536019.Mesop_1922+(plastid)
536019.Mesop_0332(+)ER
536019.Mesop_5791(<)(PF08402)
536019.Mesop_2885(+)(mitochondrial); plastid
536019.Mesop_5302(PF08669) (PF01571)
536019.Mesop_5164(PF04800)(mitochondrial)
536019.Mesop_0294(+)(ER)
536019.Mesop_3828(PF08669) (PF01571)
536019.Mesop_3416(PF02653)(mitochondrial)
536019.Mesop_3540(+)(ER)
536019.Mesop_2002(+)mitochondrial; plastid
536019.Mesop_0424(PF04191)(ER)
536019.Mesop_5068+(mitochondrial)
536019.Mesop_4075(PF08669) (PF01571)
536019.Mesop_4079+(>)
536019.Mesop_3290+(PF02653)
536019.Mesop_2821(PF02653)(ER)
536019.Mesop_2107+plastid
536019.Mesop_2842(PF02371)(plastid)
536019.Mesop_6540(+)ER
536019.Mesop_4142+(PF01442)
536019.Mesop_2314(PF00050) (PF07648)
536019.Mesop_5765(PF02653)(plastid)
536019.Mesop_3351+(PF04828)
536019.Mesop_5993+plastid
536019.Mesop_5998(PF02653)(mitochondrial)
536019.Mesop_0273(PF02653)(ER)
536019.Mesop_0270+(plastid)
536019.Mesop_5745(PF08669) (PF01571)
536019.Mesop_5502(+)(mitochondrial)
536019.Mesop_3967(+)ER
536019.Mesop_4243(PF07931)(plastid)
536019.Mesop_2767(PF02371)(plastid)
536019.Mesop_2976(+)(mitochondrial)
536019.Mesop_5728(+)(mitochondrial)
536019.Mesop_5729(PF08669) (PF01571)
536019.Mesop_1898+(plastid)
536019.Mesop_5395+(PF02653)
536019.Mesop_2498(PF08402)(plastid)
536019.Mesop_3049+(PF02653)
536019.Mesop_2930(+)(mitochondrial)
536019.Mesop_1762++
536019.Mesop_5536+(>)
536019.Mesop_1933(+)mitochondrial
536019.Mesop_5457(PF13407)(ER)
536019.Mesop_1102+(plastid)
536019.Mesop_5891+(mitochondrial)
536019.Mesop_0307(PF02371)(plastid)
536019.Mesop_0534+plastid
536019.Mesop_1469(PF08669) (PF01571)
536019.Mesop_1693(+)(mitochondrial); (plastid)
536019.Mesop_6358(+)(mitochondrial)
536019.Mesop_5964(+)(ER)
536019.Mesop_1992+plastid
536019.Mesop_4766+(mitochondrial)
536019.Mesop_2622(+)ER
536019.Mesop_6427(PF13407)(plastid)
536019.Mesop_6195(PF09587)(plastid)
536019.Mesop_0731(>)(PF06472)
536019.Mesop_5362+(mitochondrial)
536019.Mesop_6445+(PF04299)
536019.Mesop_0711(PF08669) (PF01571)
536019.Mesop_6189+(PF02902)
536019.Mesop_4887(+)(mitochondrial); (plastid)
536019.Mesop_5343(+)(mitochondrial)
536019.Mesop_1587(PF04752)(plastid)
536019.Mesop_2587(PF08669) (PF01571)
536019.Mesop_4395(>)(mitochondrial)
536019.Mesop_2854(PF02371)(plastid)
536019.Mesop_5348+(plastid)
536019.Mesop_0208(+)(ER)
536019.Mesop_1170(+)(mitochondrial); (plastid)
536019.Mesop_1263(>)(PF02653)
536019.Mesop_5276+
536019.Mesop_0652+
536019.Mesop_6558(PF13480)
536019.Mesop_3566+
536019.Mesop_6044+
536019.Mesop_6048+
536019.Mesop_3917+
536019.Mesop_0077(PF01068)
536019.Mesop_4826(PF04828)
536019.Mesop_0673(PF02653)
536019.Mesop_0242+
536019.Mesop_4007+
536019.Mesop_1079(PF01755)
536019.Mesop_5751+
536019.Mesop_6187+
536019.Mesop_3206+
536019.Mesop_6324(+)(mitochondrial)
536019.Mesop_6106(>)
536019.Mesop_5562+
536019.Mesop_5694(PF08402)
536019.Mesop_0057+
536019.Mesop_5328(PF01192)
536019.Mesop_5432+
536019.Mesop_2345(PF02746)
536019.Mesop_2340+
536019.Mesop_2348(PF02371)
536019.Mesop_6512(PF01068)
536019.Mesop_3362(>)
536019.Mesop_0863+
536019.Mesop_1887(+)(PF08402)
536019.Mesop_3959(PF01068)
536019.Mesop_4637(+)plastid
536019.Mesop_1430(+)+
536019.Mesop_2779(+)+
536019.Mesop_2862(<)
536019.Mesop_0639+
536019.Mesop_1940(+)(PF11927)
536019.Mesop_6283(PF09587)
536019.Mesop_5241+
536019.Mesop_0845+
536019.Mesop_1714(+)(mitochondrial)
536019.Mesop_4387+
536019.Mesop_5388(PF08402)
536019.Mesop_5544(PF00834)
536019.Mesop_2921+
536019.Mesop_2923+
536019.Mesop_2922(PF08402)
536019.Mesop_2549+
536019.Mesop_0376(PF08402)
536019.Mesop_3632+
536019.Mesop_3634+
536019.Mesop_0706+
536019.Mesop_4417+
536019.Mesop_5908(PF08402)
536019.Mesop_5100+
536019.Mesop_5104+
536019.Mesop_5105+
536019.Mesop_5902(PF02746)
536019.Mesop_3063(PF02653)
536019.Mesop_3468(PF04752)
536019.Mesop_1908+
536019.Mesop_3054(>)
536019.Mesop_4081+
536019.Mesop_4082(PF04828)
536019.Mesop_0353(<)
536019.Mesop_1110(+)(PF05899)
536019.Mesop_1112(>)
536019.Mesop_4322(PF06202)
536019.Mesop_4999+
536019.Mesop_6165+
536019.Mesop_3674(>)
536019.Mesop_2672(PF16952)
536019.Mesop_5923(>)
536019.Mesop_1131+not used
536019.Mesop_1075+
536019.Mesop_1073+
536019.Mesop_2449+
536019.Mesop_5577+
536019.Mesop_6148(+)+
536019.Mesop_6208+
536019.Mesop_6206+
536019.Mesop_6207(+)(PF06325)
536019.Mesop_5876+
536019.Mesop_0316+
536019.Mesop_0311+
536019.Mesop_1113(PF08402)
536019.Mesop_2653+
536019.Mesop_5940+
536019.Mesop_3405(PF02653)
536019.Mesop_3401(PF08402)
536019.Mesop_1687(PF01321)
536019.Mesop_2883(+)(PF02653)
536019.Mesop_3134(>)
536019.Mesop_2469(+)(mitochondrial)
536019.Mesop_4959+
536019.Mesop_4792(>)
536019.Mesop_6625(+)(PF02653)
536019.Mesop_2564+
536019.Mesop_1109(PF05899)
536019.Mesop_4361(+)(>)
536019.Mesop_2406+
536019.Mesop_0120(PF06325)
536019.Mesop_0128+
536019.Mesop_1535(PF05899)
536019.Mesop_1534+
536019.Mesop_1532(PF02653)
536019.Mesop_1538+
536019.Mesop_4976(PF02371)
536019.Mesop_1984(>)
536019.Mesop_1989+
536019.Mesop_2185(<)
536019.Mesop_0720(PF08402)
536019.Mesop_6600(PF02653)
536019.Mesop_6607(>)
536019.Mesop_4119(+)(ER)
536019.Mesop_4114(>)
536019.Mesop_2618(PF04828)
536019.Mesop_0910(PF02371)
536019.Mesop_0911+
536019.Mesop_4340(PF01068)
536019.Mesop_6466(PF00656)
536019.Mesop_1082(PF06325)
536019.Mesop_3779(PF01068)
536019.Mesop_4915+
536019.Mesop_2162+
536019.Mesop_0701(PF06792)
536019.Mesop_4286+
536019.Mesop_4753(PF04828)
536019.Mesop_4136(PF02746)
536019.Mesop_5848+
536019.Mesop_3544(PF07478)
536019.Mesop_5921(PF01321)
536019.Mesop_0936+
536019.Mesop_3152+
536019.Mesop_4320(PF06202)
536019.Mesop_0683(+)(plastid)
536019.Mesop_1570+
536019.Mesop_1577(PF06472)
536019.Mesop_0164+
536019.Mesop_1416(PF00162)
536019.Mesop_0891(PF01321)
536019.Mesop_6398+
536019.Mesop_0428(PF04828)
536019.Mesop_0390+
536019.Mesop_1380+
536019.Mesop_5066(<)
536019.Mesop_5600(+)plastid
536019.Mesop_5703(PF13407)
536019.Mesop_6008+
536019.Mesop_3522(+)(PF00112)
536019.Mesop_1139+
536019.Mesop_6338(PF02746)
536019.Mesop_4455(+)plastid
536019.Mesop_5477(>)
536019.Mesop_0189(PF01755)
536019.Mesop_0188(PF01755)
536019.Mesop_0184+
536019.Mesop_5290(PF04828)
536019.Mesop_2020(>)
536019.Mesop_2025(+)(plastid)
536019.Mesop_0747(PF07478)
536019.Mesop_0746(<)
536019.Mesop_0745+
536019.Mesop_1832+
536019.Mesop_1834(PF02653)
536019.Mesop_0405+
536019.Mesop_0401+
536019.Mesop_4719(PF05990)
536019.Mesop_4715+
536019.Mesop_4716+
536019.Mesop_4710+
536019.Mesop_5044+
536019.Mesop_4894(PF13480)
536019.Mesop_4870+
536019.Mesop_4876(+)(PF05899)
536019.Mesop_4574(>)
536019.Mesop_4057(PF06241)
536019.Mesop_1028+
536019.Mesop_4507+
536019.Mesop_5458+
536019.Mesop_0213(PF08402)
536019.Mesop_0212(PF08402)
536019.Mesop_3937(>)
536019.Mesop_2590(PF01321)
536019.Mesop_3313+
536019.Mesop_3270(PF02653)
536019.Mesop_4609+
536019.Mesop_3429(+)(PF02653)
536019.Mesop_5225+
536019.Mesop_0023+
536019.Mesop_4550+
536019.Mesop_4850(>)
536019.Mesop_1648+not used
536019.Mesop_5953+
536019.Mesop_6546+
536019.Mesop_0231(+)(<)
536019.Mesop_2064+
536019.Mesop_1781(PF08402)
536019.Mesop_3337(PF07478)
536019.Mesop_3254+
536019.Mesop_1879+
536019.Mesop_4835+
536019.Mesop_4836(PF04299)
536019.Mesop_1668+
536019.Mesop_1663+
536019.Mesop_1667(PF06736)
536019.Mesop_1120+
536019.Mesop_2861(PF02653)
536019.Mesop_6529+
536019.Mesop_4019(PF02653)
536019.Mesop_2087+
536019.Mesop_3687(>)
536019.Mesop_3513(>)
536019.Mesop_0815(PF01068)
536019.Mesop_0812+
536019.Mesop_3359+
536019.Mesop_1306+
536019.Mesop_5996+
536019.Mesop_6294(PF02371)
536019.Mesop_5570+
536019.Mesop_2026(PF07787)
536019.Mesop_1218+
536019.Mesop_1212+
536019.Mesop_1211+
536019.Mesop_4816+
536019.Mesop_2330+
536019.Mesop_0660(PF06736)
536019.Mesop_3442(PF02653)
536019.Mesop_0276+
536019.Mesop_0874(PF02371)
536019.Mesop_6151+
536019.Mesop_2295(PF01321)
536019.Mesop_2291+
536019.Mesop_2290+
536019.Mesop_5512(+)(PF04299)
536019.Mesop_1234+
536019.Mesop_4606+
536019.Mesop_0044+
536019.Mesop_0045+
536019.Mesop_3584+
536019.Mesop_4240+
536019.Mesop_2357+
536019.Mesop_3176(PF13480)
536019.Mesop_1954+
536019.Mesop_1957+
536019.Mesop_6291+
536019.Mesop_6297(+)(PF01321)
536019.Mesop_0606(PF04828)
536019.Mesop_2973+
536019.Mesop_5726(PF11927)
536019.Mesop_5722(+)(PF04828)
536019.Mesop_3393(PF08402)
536019.Mesop_3396(PF13407)
536019.Mesop_0859+
536019.Mesop_3879(>)
536019.Mesop_5539(PF00162)
536019.Mesop_5532+
536019.Mesop_6410(+)+
536019.Mesop_5392+
536019.Mesop_6274(PF02371)
536019.Mesop_2574(PF02746)
536019.Mesop_2571(PF02746)
536019.Mesop_5709(PF02746)
536019.Mesop_1701(PF04828)
536019.Mesop_1706(PF02746)
536019.Mesop_3507+
536019.Mesop_6029+
536019.Mesop_5308(+)(plastid)
536019.Mesop_6488(PF04800)
536019.Mesop_6489+
536019.Mesop_4426(PF06472)
536019.Mesop_1147(PF08402)
536019.Mesop_5119+
536019.Mesop_3040(PF08402)
536019.Mesop_2931(PF01068)
536019.Mesop_2554(PF08402)
536019.Mesop_0342+
536019.Mesop_3180(PF01068)
536019.Mesop_6346(PF07478)
536019.Mesop_4663(PF08402)
536019.Mesop_1477(PF08402)
536019.Mesop_5137+
536019.Mesop_5133PF05686
536019.Mesop_5975(<)
536019.Mesop_4986+
536019.Mesop_2915(PF05899)
536019.Mesop_3084(+)(PF04752)
536019.Mesop_1330+
536019.Mesop_1748(PF00656)
536019.Mesop_1749+
536019.Mesop_1740(+)(PF08402)
536019.Mesop_3880(>)
536019.Mesop_5456(+)(PF02653)
536019.Mesop_0513(PF02653)
536019.Mesop_0511(PF02746)
536019.Mesop_4465+
536019.Mesop_3129+
536019.Mesop_5331+
536019.Mesop_5156+
536019.Mesop_5150+
536019.Mesop_0627+
536019.Mesop_0306+
536019.Mesop_3648(PF05368)
536019.Mesop_0531(PF00656)
536019.Mesop_1121+
536019.Mesop_3780+
536019.Mesop_0499(PF02653)
536019.Mesop_1150(PF02371)
536019.Mesop_4433+
536019.Mesop_2573(PF02746)
536019.Mesop_1690(PF06792)
536019.Mesop_5701(PF02653)
536019.Mesop_6443+
536019.Mesop_4313(PF01192)
536019.Mesop_4314(PF04800)
536019.Mesop_4315+
536019.Mesop_1503+
536019.Mesop_1445(PF02653)
536019.Mesop_6618(+)(plastid)
536019.Mesop_0476(PF02653)
536019.Mesop_6579+
536019.Mesop_4102(PF08402)
536019.Mesop_2627(+)+
536019.Mesop_4043(>)
536019.Mesop_3578(+)(PF02653)
536019.Mesop_0900+
536019.Mesop_6422(<)
536019.Mesop_5424(<)
536019.Mesop_1423(>)
536019.Mesop_1429(+)(plastid)
536019.Mesop_4555(PF13480)
536019.Mesop_2198(<)
536019.Mesop_3441(PF02653)
536019.Mesop_0733+
536019.Mesop_0734(PF00834)
536019.Mesop_4292+
536019.Mesop_6671(>)
536019.Mesop_4121(PF04828)
536019.Mesop_4120+
536019.Mesop_2537+
536019.Mesop_3557(PF06325)
536019.Mesop_3555(PF01321)
536019.Mesop_6071(PF00112)
536019.Mesop_0927(+)+
536019.Mesop_3800(PF04191)
536019.Mesop_2409(+)+
536019.Mesop_5867(<)
536019.Mesop_4350(<)
536019.Mesop_5404(+)(plastid)
536019.Mesop_3764+
536019.Mesop_0157(PF01633)
536019.Mesop_1545(PF08402)
536019.Mesop_2171+
536019.Mesop_2174+
536019.Mesop_6389+
536019.Mesop_5431+
536019.Mesop_3526+
536019.Mesop_5094(PF02653)
536019.Mesop_4427+
536019.Mesop_4425(+)(mitochondrial)
536019.Mesop_0947(PF02371)
536019.Mesop_3144+
536019.Mesop_5846(PF02653)
536019.Mesop_5843(PF06792)
536019.Mesop_5465+
536019.Mesop_5289(PF04828)
536019.Mesop_2030(PF08402)
536019.Mesop_2158+
536019.Mesop_6054+
536019.Mesop_0776(+)(plastid)
536019.Mesop_0773(+)(plastid)
536019.Mesop_0410+
536019.Mesop_5710(PF02746)
536019.Mesop_1001(>)
536019.Mesop_6421(+)plastid
536019.Mesop_3104(+)(plastid)
536019.Mesop_3922+
536019.Mesop_5823(PF00834)
536019.Mesop_4062+
536019.Mesop_2685+
536019.Mesop_3875(PF01321)
536019.Mesop_3870+
536019.Mesop_2580(PF02746)
536019.Mesop_2139(PF02653)
536019.Mesop_3804+not used
536019.Mesop_3264+
536019.Mesop_5580+not used
536019.Mesop_5581(PF01755)
536019.Mesop_5059+
536019.Mesop_5635(+)(mitochondrial)
536019.Mesop_1246+
536019.Mesop_4864+
536019.Mesop_1635(PF02371)
536019.Mesop_1638(PF13480)
536019.Mesop_4397+
536019.Mesop_2859(PF02746)
536019.Mesop_2858+
536019.Mesop_3414(PF02653)
536019.Mesop_6575+
536019.Mesop_6578+
536019.Mesop_3305(PF05368)
536019.Mesop_6367(PF02371)
536019.Mesop_4215(PF06202)
536019.Mesop_5034(PF02746)
536019.Mesop_2689+
536019.Mesop_2680(PF04299)
536019.Mesop_0011+
536019.Mesop_1264(PF02653)
536019.Mesop_4844(PF13480)
536019.Mesop_4848(PF01321)
536019.Mesop_5274(+)
536019.Mesop_0651(+)
536019.Mesop_2302(+)
536019.Mesop_6302(+)
536019.Mesop_0798(+)
536019.Mesop_1841(+)
536019.Mesop_4491(+)
536019.Mesop_4532(+)
536019.Mesop_1207(+)
536019.Mesop_1206(+)
536019.Mesop_4828(+)
536019.Mesop_6095(+)
536019.Mesop_3170(+)
536019.Mesop_1198(+)
536019.Mesop_4804(+)
536019.Mesop_3591(+)
536019.Mesop_5913(+)
536019.Mesop_2756(+)
536019.Mesop_2963(+)
536019.Mesop_6514(+)
536019.Mesop_3360(+)
536019.Mesop_3361(+)
536019.Mesop_1739(+)
536019.Mesop_5657(+)
536019.Mesop_1885(+)
536019.Mesop_2282(+)
536019.Mesop_4404(+)
536019.Mesop_2772(+)
536019.Mesop_2568(+)
536019.Mesop_1719(+)
536019.Mesop_1716(+)
536019.Mesop_4430(+)
536019.Mesop_1154(+)
536019.Mesop_5526(+)
536019.Mesop_5542(+)
536019.Mesop_3160(+)
536019.Mesop_5384(+)
536019.Mesop_1968(+)
536019.Mesop_1772(+)
536019.Mesop_3194(+)
536019.Mesop_0564(+)
536019.Mesop_3837(+)
536019.Mesop_3460(+)
536019.Mesop_6241(+)not used
536019.Mesop_6248(+)
536019.Mesop_1902(+)
536019.Mesop_2906(+)
536019.Mesop_3615(+)
536019.Mesop_3238(+)
536019.Mesop_4694(+)
536019.Mesop_4696(+)
536019.Mesop_1408(+)
536019.Mesop_6167(+)
536019.Mesop_1924(+)
536019.Mesop_3677(+)
536019.Mesop_6061(+)
536019.Mesop_0521(+)
536019.Mesop_4324(+)
536019.Mesop_1135(+)
536019.Mesop_5576(+)
536019.Mesop_6477(+)
536019.Mesop_5145(+)
536019.Mesop_1498(+)
536019.Mesop_4155(+)
536019.Mesop_0063(+)
536019.Mesop_1680(+)
536019.Mesop_2880(+)
536019.Mesop_2467(+)
536019.Mesop_2213(+)
536019.Mesop_1510(+)
536019.Mesop_5955(+)
536019.Mesop_5954(+)
536019.Mesop_3118(+)
536019.Mesop_2851(+)
536019.Mesop_3755(+)
536019.Mesop_1536(+)
536019.Mesop_1531(+)
536019.Mesop_1981(+)
536019.Mesop_5487(+)
536019.Mesop_6019(+)
536019.Mesop_0919(+)
536019.Mesop_3821(+)
536019.Mesop_6461(+)
536019.Mesop_4914(+)
536019.Mesop_5568(+)
536019.Mesop_6668(+)
536019.Mesop_6664(+)
536019.Mesop_6660(+)
536019.Mesop_5088(+)
536019.Mesop_5412(+)
536019.Mesop_1579(+)
536019.Mesop_4934(+)
536019.Mesop_2000(+)
536019.Mesop_0898(+)
536019.Mesop_6393(+)
536019.Mesop_0422(+)
536019.Mesop_6640(+)
536019.Mesop_5607(+)
536019.Mesop_0953(+)
536019.Mesop_3217(+)
536019.Mesop_3212(+)
536019.Mesop_0185(+)
536019.Mesop_3295(+)
536019.Mesop_5049(+)
536019.Mesop_5627(+)
536019.Mesop_6566(+)
536019.Mesop_3882(+)
536019.Mesop_3312(+)
536019.Mesop_3422(+)
536019.Mesop_2800(+)
536019.Mesop_5854(+)
536019.Mesop_5025(+)
536019.Mesop_5227(+)
536019.Mesop_4551(+)
536019.Mesop_4854(+)
536019.Mesop_5956(+)
536019.Mesop_6544(+)
536019.Mesop_4529(+)
536019.Mesop_1785(+)
536019.Mesop_3330(+)
536019.Mesop_0784(+)
536019.Mesop_4207(+)
536019.Mesop_5008(+)
536019.Mesop_5002(+)
536019.Mesop_1665(+)
536019.Mesop_1664(+)
536019.Mesop_4330(+)not used
536019.Mesop_2318(+)
536019.Mesop_0642(+)
536019.Mesop_1061(+)
536019.Mesop_6315(+)
536019.Mesop_6318(+)
536019.Mesop_3909(+)
536019.Mesop_0069(+)
536019.Mesop_6087(+)
536019.Mesop_3447(+)
536019.Mesop_5748(+)
536019.Mesop_3377(+)
536019.Mesop_0876(+)
536019.Mesop_3951(+)
536019.Mesop_5500(+)
536019.Mesop_1456(+)
536019.Mesop_5513(+)
536019.Mesop_0597(+)
536019.Mesop_3582(+)
536019.Mesop_4241(+)
536019.Mesop_2766(+)
536019.Mesop_3006(+)
536019.Mesop_5720(+)
536019.Mesop_0856(+)
536019.Mesop_5449(+)
536019.Mesop_5448(+)
536019.Mesop_3133(+)
536019.Mesop_6414(+)
536019.Mesop_5390(+)
536019.Mesop_5399(+)
536019.Mesop_2708(+)
536019.Mesop_2700(+)
536019.Mesop_6032(+)
536019.Mesop_2953(+)
536019.Mesop_2957(+)
536019.Mesop_6487(+)
536019.Mesop_4428(+)
536019.Mesop_1141(+)not used
536019.Mesop_0559(+)
536019.Mesop_0082(+)not used
536019.Mesop_1354(+)
536019.Mesop_2233(+)
536019.Mesop_1299(+)
536019.Mesop_4953(+)not used
536019.Mesop_4950(+)
536019.Mesop_5973(+)
536019.Mesop_6588(+)
536019.Mesop_3065(+)
536019.Mesop_3082(+)
536019.Mesop_3088(+)
536019.Mesop_1336+
536019.Mesop_3667(+)
536019.Mesop_4509(+)
536019.Mesop_1107(+)
536019.Mesop_5338(+)
536019.Mesop_5968(+)
536019.Mesop_1487(+)
536019.Mesop_6173(+)
536019.Mesop_0680(+)
536019.Mesop_1291(+)
536019.Mesop_3437(+)
536019.Mesop_4948(+)
536019.Mesop_2253(+)
536019.Mesop_3120(+)
536019.Mesop_3126(+)
536019.Mesop_5256(+)
536019.Mesop_5192(+)
536019.Mesop_1997(+)
536019.Mesop_4765(+)
536019.Mesop_4105(+)
536019.Mesop_4516(+)
536019.Mesop_3573(+)
536019.Mesop_0903(+)
536019.Mesop_6425(+)
536019.Mesop_6438(+)
536019.Mesop_0135(+)
536019.Mesop_0735(+)
536019.Mesop_4294(+)
536019.Mesop_4291(+)
536019.Mesop_0451(+)
536019.Mesop_4335(+)
536019.Mesop_2015(+)
536019.Mesop_0715(+)
536019.Mesop_0716(+)
536019.Mesop_5096(+)
536019.Mesop_4977(+)
536019.Mesop_2545(+)
536019.Mesop_3856(+)
536019.Mesop_2034(+)
536019.Mesop_0888(+)
536019.Mesop_0889(+)
536019.Mesop_1824(+)
536019.Mesop_3107(+)
536019.Mesop_4882(+)
536019.Mesop_0962(+)
536019.Mesop_2838(+)
536019.Mesop_4067(+)
536019.Mesop_3721(+)
536019.Mesop_0752(+)
536019.Mesop_0753(+)
536019.Mesop_1805(+)
536019.Mesop_5737(+)
536019.Mesop_4185(+)
536019.Mesop_5633(+)
536019.Mesop_1241(+)
536019.Mesop_1242(+)
536019.Mesop_5870(+)
536019.Mesop_2073(+)
536019.Mesop_1862(+)
536019.Mesop_4219(+)
536019.Mesop_5031(+)
536019.Mesop_5039(+)
536019.Mesop_1265(+)
536019.Mesop_2870(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 0.2 (2/10 KEGG proteins)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 2.1 (21/10 KEGG proteins)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 0.25 (2/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================