Effective results for Streptomyces viridochromogenes DSM 40736 (eggnog40)

Summary

Number of putative secreted proteins: 274
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 56 eukaryotic-like domains, contained in 274 proteins (1 high, 273 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
591159.SSQG_06483(PF02129) (PF08530)ER
591159.SSQG_02771(PF02129) (PF08530)mitochondrial
591159.SSQG_06415(PF02129) (PF08530)(mitochondrial)
591159.SSQG_06734(PF02129) (PF08530)mitochondrial
591159.SSQG_02159(PF09362)(ER)
591159.SSQG_00844(PF00652)(mitochondrial); plastid
591159.SSQG_01700(PF13185)ER
591159.SSQG_00860(PF00652)mitochondrial
591159.SSQG_05049(PF07250)(ER); ER
591159.SSQG_05046(PF13641)ER
591159.SSQG_00498(PF07228)mitochondrial; (mitochondrial)
591159.SSQG_00491(PF07335)mitochondrial
591159.SSQG_06894(PF05653)ER
591159.SSQG_00806(PF00544)(ER); (mitochondrial)
591159.SSQG_00807(PF03211)mitochondrial
591159.SSQG_06407(PF08386)(ER)
591159.SSQG_02518(PF08386)(mitochondrial)
591159.SSQG_04022(PF07228) (PF13185)(ER)
591159.SSQG_00101(PF08386)ER
591159.SSQG_06259(PF14686) (PF09284) (PF14683)
591159.SSQG_06258(PF00652)ER
591159.SSQG_01453(PF08022)ER
591159.SSQG_07440(PF14587)(mitochondrial); mitochondrial
591159.SSQG_06271(PF01419)ER
591159.SSQG_03229(PF00652)mitochondrial
591159.SSQG_00085(PF04264)(ER)
591159.SSQG_04170(PF01839)ER
591159.SSQG_04175(PF13641)mitochondrial; ER
591159.SSQG_01275(PF08376)ER
591159.SSQG_06721(PF09362)(ER)
591159.SSQG_01020(PF05653)ER
591159.SSQG_00701(PF08386)mitochondrial
591159.SSQG_06114(PF13641)ER
591159.SSQG_05842(PF03747)(ER)
591159.SSQG_02896(PF01341)(mitochondrial)
591159.SSQG_05981(PF14378)ER
591159.SSQG_06379(PF07228)ER
591159.SSQG_07359(PF07228)ER
591159.SSQG_00974(PF07228)(mitochondrial)
591159.SSQG_06536(PF01341)ER
591159.SSQG_03973(PF10009)mitochondrial; (mitochondrial)
591159.SSQG_00851(PF00652)mitochondrial
591159.SSQG_00853(PF00652)ER
591159.SSQG_00852(PF00652)(ER); plastid
591159.SSQG_00854(PF00652)mitochondrial
591159.SSQG_01106(PF08386)ER
591159.SSQG_06590(PF04264)mitochondrial
591159.SSQG_02101(PF02450)(ER)
591159.SSQG_06695(PF08386)(ER); ER
591159.SSQG_03653(PF00544)(ER)
591159.SSQG_00661(PF13641)ER
591159.SSQG_06889(PF07228)ER
591159.SSQG_04487(PF03995)ER
591159.SSQG_00645(PF07228)ER
591159.SSQG_00641(PF03664)ER
591159.SSQG_00642(PF01341)ER
591159.SSQG_00562(PF07228)ER
591159.SSQG_00300(PF07228)mitochondrial
591159.SSQG_07455(PF04264)(mitochondrial)
591159.SSQG_00158(PF07228)(mitochondrial); (plastid)
591159.SSQG_06268(PF07335)ER
591159.SSQG_02582(PF04264)mitochondrial
591159.SSQG_01074(PF13653)mitochondrial
591159.SSQG_04167(PF01839)ER
591159.SSQG_04168(PF01839)ER
591159.SSQG_01011(PF12222)ER
591159.SSQG_07601(PF07228)mitochondrial
591159.SSQG_05606(PF08376)mitochondrial; (mitochondrial)
591159.SSQG_06387(PF07286)(mitochondrial); plastid
591159.SSQG_04124(PF03068)ER
591159.SSQG_06974(PF05270)ER
591159.SSQG_07592(PF01186)mitochondrial
591159.SSQG_07622(PF02983)ER
591159.SSQG_01637(PF02983)ER; (ER)
591159.SSQG_01638(PF02983)mitochondrial; (mitochondrial)
591159.SSQG_00224(PF02983)mitochondrial; ER
591159.SSQG_07327(PF02983)mitochondrial
591159.SSQG_07303(PF07228) (PF13185)not used
591159.SSQG_03350(PF02129) (PF08530)
591159.SSQG_06449(PF07228) (PF13185)
591159.SSQG_06090(PF07228)(ER)
591159.SSQG_05294(PF04539) (PF04545)
591159.SSQG_00358(PF04539) (PF04545)
591159.SSQG_03783(PF04264)(mitochondrial)
591159.SSQG_00140(PF07228) (PF13185)
591159.SSQG_07059(PF06245)(plastid)
591159.SSQG_07428(PF07228) (PF13185)
591159.SSQG_00278(PF04539) (PF04545)
591159.SSQG_00933(PF02129) (PF08530)
591159.SSQG_02893(PF07646)(mitochondrial)
591159.SSQG_00728(PF00183) (PF13589)
591159.SSQG_06981(PF07228) (PF13185)
591159.SSQG_06515(PF04539) (PF04545)
591159.SSQG_07264(PF02983)(ER)
591159.SSQG_03139(PF04539) (PF04545)
591159.SSQG_07336(PF07228) (PF13185)
591159.SSQG_06475(PF07228) (PF13185)
591159.SSQG_03344(PF02129) (PF08530)
591159.SSQG_00629(PF05270)(mitochondrial)
591159.SSQG_00644(PF07228) (PF13185)
591159.SSQG_00640(PF00652)plastid
591159.SSQG_05139(PF07228) (PF13185)
591159.SSQG_00568(PF02129) (PF08530)
591159.SSQG_00306(PF04539) (PF04545)
591159.SSQG_00175(PF00183) (PF13589)
591159.SSQG_00178(PF03318)(ER)
591159.SSQG_07488(PF04539) (PF04545)
591159.SSQG_07269(PF07228) (PF13185)
591159.SSQG_07265(PF07228) (PF13185)
591159.SSQG_03779(PF04539) (PF04545)
591159.SSQG_03778(PF04539) (PF04545)
591159.SSQG_04511(PF13535)plastid
591159.SSQG_04169(PF01839)plastid
591159.SSQG_05629(PF00183) (PF13589)
591159.SSQG_03717(PF04539) (PF04545)
591159.SSQG_03291(PF04539) (PF04545)
591159.SSQG_05669(PF04539) (PF04545)
591159.SSQG_02461(PF04539) (PF04545)
591159.SSQG_05854(PF04539) (PF04545)
591159.SSQG_06998(PF04539) (PF04545)
591159.SSQG_06818(PF07228) (PF13185)
591159.SSQG_06870(PF03984)
591159.SSQG_05219(PF08386)
591159.SSQG_01326(PF01341)
591159.SSQG_00630(PF00652)
591159.SSQG_06581(PF03259)
591159.SSQG_06583(PF03029)
591159.SSQG_02173(PF14378)
591159.SSQG_01397(PF05270)
591159.SSQG_02917(PF13589)
591159.SSQG_02911(PF02450)
591159.SSQG_06445(PF10009)
591159.SSQG_00471(PF07228)
591159.SSQG_05705(PF00652)
591159.SSQG_00861(PF03664)
591159.SSQG_06421(PF02882)
591159.SSQG_06159(PF07228)
591159.SSQG_04056(PF04264)
591159.SSQG_04051(PF13185)
591159.SSQG_05296(PF02148)
591159.SSQG_01196(PF00652)
591159.SSQG_06174(PF03259)
591159.SSQG_06175(PF08376)
591159.SSQG_06172(PF03029)
591159.SSQG_01506(PF03029)
591159.SSQG_01508(PF03259)
591159.SSQG_02684(PF04545)
591159.SSQG_01971(PF03747)not used
591159.SSQG_01970(PF03747)
591159.SSQG_01973(PF03747)
591159.SSQG_01972(PF03747)
591159.SSQG_00161(PF04545)
591159.SSQG_01788(PF00544)
591159.SSQG_01785(PF03211)
591159.SSQG_06780(PF03029)
591159.SSQG_07250(PF00652)
591159.SSQG_05781(PF13185)
591159.SSQG_01102(PF07228)
591159.SSQG_03784(PF13185)
591159.SSQG_03785(PF13185)
591159.SSQG_05338(PF03259)
591159.SSQG_05337(PF08376)
591159.SSQG_03014(PF13641)
591159.SSQG_06274(PF13185)
591159.SSQG_02572(PF07228)
591159.SSQG_02573(PF13185)
591159.SSQG_04505(PF13535)
591159.SSQG_00083(PF01839)
591159.SSQG_01687(PF06245)
591159.SSQG_03763(PF07228)
591159.SSQG_07423(PF03259)
591159.SSQG_06922(PF07228)not used
591159.SSQG_06928(PF04545)
591159.SSQG_02298(PF14378)
591159.SSQG_01274(PF03259)
591159.SSQG_01271(PF03029)
591159.SSQG_06059(PF04545)
591159.SSQG_04767(PF03995)
591159.SSQG_04766(PF03995)
591159.SSQG_04075(PF08386)
591159.SSQG_00250(PF03029)
591159.SSQG_06707(PF01896)
591159.SSQG_06706(PF07228)
591159.SSQG_02623(PF13185)
591159.SSQG_07537(PF07228)
591159.SSQG_05783(PF13185)
591159.SSQG_07619(PF07228)
591159.SSQG_00398(PF07228)
591159.SSQG_00932(PF13535)
591159.SSQG_00931(PF07228)
591159.SSQG_02646(PF07228)
591159.SSQG_06980(PF13185)
591159.SSQG_02323(PF13641)
591159.SSQG_00212(PF09362)
591159.SSQG_01882(PF04264)
591159.SSQG_06686(PF14378)
591159.SSQG_03309(PF10009)
591159.SSQG_04894(PF02882)
591159.SSQG_04523(PF13535)
591159.SSQG_03170(PF12862)
591159.SSQG_02165(PF07228)
591159.SSQG_06864(PF06241)
591159.SSQG_03694(PF07228)
591159.SSQG_05593(PF04264)
591159.SSQG_05598(PF03029)
591159.SSQG_03341(PF07228)
591159.SSQG_02904(PF07228)
591159.SSQG_01101(PF07228)
591159.SSQG_06457(PF03747)
591159.SSQG_04360(PF13641)
591159.SSQG_00990(PF13535)
591159.SSQG_04620(PF13641)
591159.SSQG_00299(PF07228)
591159.SSQG_01474(PF07228)
591159.SSQG_05035(PF04545)
591159.SSQG_04979(PF01744)
591159.SSQG_02386(PF13363)
591159.SSQG_04604(PF00648)
591159.SSQG_03383(PF03747)
591159.SSQG_00813PF03452
591159.SSQG_00487(PF07228)
591159.SSQG_01283(PF07286)
591159.SSQG_06165(PF08022)
591159.SSQG_02866(PF14378)
591159.SSQG_03008(PF04545)
591159.SSQG_07543(PF02148)
591159.SSQG_01791(PF00544)
591159.SSQG_07240(PF00652)
591159.SSQG_07243(PF07228)
591159.SSQG_04493(PF13535)
591159.SSQG_02222(PF13535)
591159.SSQG_05114(PF07228)
591159.SSQG_00325(PF02148)
591159.SSQG_06491(PF01896)
591159.SSQG_01052(PF03029)
591159.SSQG_01050(PF03259)
591159.SSQG_01054(PF03259)
591159.SSQG_01055(PF08376)
591159.SSQG_07458(PF07228)
591159.SSQG_00157(PF13185)
591159.SSQG_02801(PF13641)
591159.SSQG_04517(PF13535)
591159.SSQG_02005(PF10009)
591159.SSQG_03750(PF13589)
591159.SSQG_04161(PF00652)
591159.SSQG_05340(PF03029)
591159.SSQG_07222(PF03259)
591159.SSQG_07224(PF03029)
591159.SSQG_00051(PF03995)
591159.SSQG_03084(PF13641)
591159.SSQG_05604(PF03259)
591159.SSQG_05602(PF03029)
591159.SSQG_05601(PF08376)
591159.SSQG_05600(PF03259)
591159.SSQG_00654(PF13185)
591159.SSQG_01659(PF03747)
591159.SSQG_00921(PF07228)
591159.SSQG_06384(PF08376)
591159.SSQG_03711(PF07228)
591159.SSQG_03715(PF07228)
591159.SSQG_02611(PF01839)
591159.SSQG_01835(PF05270)
591159.SSQG_00248(PF03259)
591159.SSQG_06975(PF07228)
591159.SSQG_05996(PF04264)
591159.SSQG_03598(PF07228)
591159.SSQG_06778(PF03259)
591159.SSQG_04843(PF04545)
591159.SSQG_03825(PF07228)
591159.SSQG_07121(PF02882)
591159.SSQG_00204(PF07228)
591159.SSQG_00205(PF13185)
591159.SSQG_04084(PF14587)
591159.SSQG_05935(PF07228)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================