Effective results for Oribacterium sp. oral taxon 078 str. F0262 (eggnog40)

Summary

Number of putative secreted proteins: 45
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 15 eukaryotic-like domains, contained in 45 proteins (5 high, 40 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
608534.GCWU000341_02273(PF06541)ER
608534.GCWU000341_01889(PF13151)(mitochondrial); mitochondrial
608534.GCWU000341_02122(PF01094)(ER)
608534.GCWU000341_02734(PF06541)ER
608534.GCWU000341_00252(PF06541)ER
608534.GCWU000341_02514(PF01000) (PF01193)
608534.GCWU000341_02924(PF01000) (PF01193)
608534.GCWU000341_00007(PF01527)
608534.GCWU000341_02442(PF01527)
608534.GCWU000341_01411(PF13240)
608534.GCWU000341_01886(PF01527)
608534.GCWU000341_01646(PF01527)
608534.GCWU000341_01644(PF01527)
608534.GCWU000341_01084(PF13240)
608534.GCWU000341_01893(PF01527)
608534.GCWU000341_02077(PF04326)
608534.GCWU000341_01660(PF07787)
608534.GCWU000341_01664(PF09359)
608534.GCWU000341_01881(PF04326)
608534.GCWU000341_01673(PF04326)
608534.GCWU000341_02019PF02450
608534.GCWU000341_00885(PF04326)
608534.GCWU000341_01605(PF01527)
608534.GCWU000341_01591PF11443
608534.GCWU000341_00218(PF13151)
608534.GCWU000341_01619(PF01527)
608534.GCWU000341_01035(PF14938)
608534.GCWU000341_02108PF02450
608534.GCWU000341_02744(PF01527)
608534.GCWU000341_02364(PF13240)
608534.GCWU000341_02696(PF09359)
608534.GCWU000341_00991(PF13240)
608534.GCWU000341_01821(PF01527)
608534.GCWU000341_00685(PF03031)
608534.GCWU000341_01885(PF01527)
608534.GCWU000341_00050(PF12646)
608534.GCWU000341_00226PF02450
608534.GCWU000341_01803(PF01527)
608534.GCWU000341_01796(PF04326)
608534.GCWU000341_01977PF02450
608534.GCWU000341_01895(PF01527)
608534.GCWU000341_02407(PF13240)
608534.GCWU000341_02959(PF01527)
608534.GCWU000341_02329(PF01527)
608534.GCWU000341_02439(PF01527)not used

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================