Effective results for Olsenella uli DSM 7084 (eggnog40)

Summary

Number of putative secreted proteins: 32
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 32 proteins (1 high, 31 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
633147.Olsu_1511(PF02361)ER
633147.Olsu_0542(PF05738)ER
633147.Olsu_1578(PF02361)(ER)
633147.Olsu_0292(PF05738)ER
633147.Olsu_1477(PF02361)ER
633147.Olsu_0359PF12873(mitochondrial)
633147.Olsu_1030(PF01228) (PF02901)
633147.Olsu_1558(PF02361)(plastid)
633147.Olsu_0297(PF01228) (PF02901)
633147.Olsu_0291(PF05738)(plastid)
633147.Olsu_0219(PF02361)(mitochondrial)
633147.Olsu_0306(PF01228) (PF02901)
633147.Olsu_1202(PF01228) (PF02901)
633147.Olsu_0124(PF01228) (PF02901)
633147.Olsu_1247(PF03437)
633147.Olsu_0591(PF04991)
633147.Olsu_0112(PF01116)
633147.Olsu_0585(PF04991)
633147.Olsu_0771(PF05738)
633147.Olsu_0481(PF02361)
633147.Olsu_1398(PF03437)
633147.Olsu_0537(PF01116)
633147.Olsu_0707(PF05738)
633147.Olsu_1554(PF02873)
633147.Olsu_0063(PF01116)
633147.Olsu_0404(PF01116)
633147.Olsu_0672(PF01116)
633147.Olsu_0609(PF04991)
633147.Olsu_0259(PF02361)
633147.Olsu_1096(PF02873)
633147.Olsu_0224(PF02361)
633147.Olsu_0682(PF01116)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================