Effective results for Desulfurobacterium thermolithotrophum DSM 11699 (eggnog40)

Summary

Number of putative secreted proteins: 59
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 59 proteins (18 high, 41 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
868864.Dester_0799(PF01609)mitochondrial
868864.Dester_1311(PF01609)mitochondrial
868864.Dester_0370(PF01609)mitochondrial
868864.Dester_1141PF13565(mitochondrial)
868864.Dester_0360PF13565(mitochondrial)
868864.Dester_0686PF13565(mitochondrial)
868864.Dester_1378(PF02516)ER
868864.Dester_0517PF13565(mitochondrial)
868864.Dester_0422(PF01609)mitochondrial
868864.Dester_0509(PF01609)mitochondrial
868864.Dester_0503(PF01609)mitochondrial
868864.Dester_0550PF13565(mitochondrial)
868864.Dester_0233PF13565(mitochondrial)
868864.Dester_1002(PF01609)mitochondrial
868864.Dester_0751(PF01609)mitochondrial
868864.Dester_0753PF13565(mitochondrial)
868864.Dester_0347(PF01609)mitochondrial
868864.Dester_1128PF13565(mitochondrial)
868864.Dester_1256PF13565(mitochondrial)
868864.Dester_0278(PF01609)mitochondrial
868864.Dester_1133PF13565(mitochondrial)
868864.Dester_0671(PF04423)mitochondrial
868864.Dester_0461(PF01609)mitochondrial
868864.Dester_0852(PF01609)mitochondrial
868864.Dester_1076(PF01609)mitochondrial
868864.Dester_0618PF13565(mitochondrial)
868864.Dester_0324(PF01609)mitochondrial
868864.Dester_0923(PF01609)mitochondrial
868864.Dester_0925PF13565(mitochondrial)
868864.Dester_0492PF13565(mitochondrial)
868864.Dester_0498(PF01609)mitochondrial
868864.Dester_1540(PF01609)mitochondrial
868864.Dester_0421(PF01609)ER
868864.Dester_0946PF04252(mitochondrial)
868864.Dester_0783(PF02371)
868864.Dester_0681PF13565
868864.Dester_1485(PF02371)
868864.Dester_1340(PF02371)
868864.Dester_0187(PF02371)
868864.Dester_0508(PF02371)
868864.Dester_1174(PF02371)
868864.Dester_1348(PF01142)
868864.Dester_1430(PF02371)
868864.Dester_0341(PF02371)
868864.Dester_1255(PF01880)
868864.Dester_0272(PF02371)
868864.Dester_1135(PF16114)
868864.Dester_1276(PF02371)
868864.Dester_0053PF01423
868864.Dester_0052(PF01609)
868864.Dester_0596(PF02371)
868864.Dester_0591(PF01880)
868864.Dester_0115(PF01142)
868864.Dester_0935(PF02371)
868864.Dester_0856PF13565
868864.Dester_1183(PF02371)
868864.Dester_0322(PF02371)
868864.Dester_1068PF04670
868864.Dester_0831(PF02371)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================