Metamenu

Effective results for Streptomyces griseoaurantiacus M045 (eggnog40)

Summary

Number of putative secreted proteins: 210
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 33 eukaryotic-like domains, contained in 210 proteins (3 high, 207 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
996637.SGM_5419(PF12972) (PF12971) (PF05089)mitochondrial
996637.SGM_1479(PF01580)mitochondrial
996637.SGM_5754(PF01839)ER
996637.SGM_1411(PF04471)ER
996637.SGM_6378(PF03663)mitochondrial; (plastid)
996637.SGM_1377(PF04471)ER
996637.SGM_1210(PF13560)(mitochondrial)
996637.SGM_4996(PF13560)mitochondrial; (mitochondrial)
996637.SGM_0753(PF03807)(mitochondrial)
996637.SGM_0888(PF01580)ER
996637.SGM_5169(PF03029)mitochondrial
996637.SGM_2783(PF13560)(mitochondrial)
996637.SGM_2448(PF13499)ER
996637.SGM_0333(PF01580)ER
996637.SGM_3905(PF13560)(mitochondrial)
996637.SGM_1560(PF13560)mitochondrial
996637.SGM_6057(PF13560)(mitochondrial)
996637.SGM_5041(PF08242)(mitochondrial)
996637.SGM_1155(PF03807)(mitochondrial); (plastid)
996637.SGM_1150(PF03663)ER
996637.SGM_1117(PF03807)(ER)
996637.SGM_6136(PF13560)mitochondrial
996637.SGM_2338(PF13560)(mitochondrial)
996637.SGM_1094(PF06241)(mitochondrial)
996637.SGM_2318(PF03644)(ER); (mitochondrial)
996637.SGM_4123(PF01839)ER
996637.SGM_4124(PF01839)mitochondrial; ER
996637.SGM_4125(PF01839)mitochondrial; ER
996637.SGM_2874(PF01073)(mitochondrial); (plastid)
996637.SGM_5196(PF07884)ER
996637.SGM_4713(PF13560)mitochondrial
996637.SGM_0712(PF12972) (PF12971) (PF05089)
996637.SGM_1389(PF04471)(mitochondrial)
996637.SGM_6458(PF07884)ER
996637.SGM_0308(PF01580)(mitochondrial)
996637.SGM_2434(PF03807)(mitochondrial)
996637.SGM_2437(PF16483)ER
996637.SGM_2412(PF03663)ER
996637.SGM_2413(PF03663)ER
996637.SGM_3722(PF01427)ER
996637.SGM_4174(PF13560)(plastid)
996637.SGM_2343(PF04471)(ER)
996637.SGM_1419(PF03457)(plastid)
996637.SGM_2684(PF16483)(ER)
996637.SGM_2983(PF13560)(mitochondrial)
996637.SGM_4708(PF01580)(mitochondrial)
996637.SGM_0082(PF05719)(ER)
996637.SGM_4927(PF03807)(plastid)
996637.SGM_0187(PF03807)plastid
996637.SGM_4602(PF13560)(mitochondrial)
996637.SGM_0751(PF13602)(mitochondrial); not used
996637.SGM_4330(PF03807)(mitochondrial)
996637.SGM_6690(PF01580)(mitochondrial)
996637.SGM_0141(PF13560)(mitochondrial)
996637.SGM_2508(PF12740)plastid
996637.SGM_1057(PF01580)(mitochondrial)
996637.SGM_1539(PF13560)mitochondrial
996637.SGM_2201(PF05719)(ER)
996637.SGM_0340(PF04471)(mitochondrial)
996637.SGM_6080(PF05719)(plastid)
996637.SGM_2597(PF13560)(mitochondrial)
996637.SGM_2100(PF13602)
996637.SGM_6332(PF13560)
996637.SGM_1738(PF13560)
996637.SGM_5969(PF03259)
996637.SGM_2344(PF13602)
996637.SGM_1693(PF13602)
996637.SGM_0981(PF13602)
996637.SGM_3758(PF13560)
996637.SGM_2665(PF03029)
996637.SGM_2667(PF03259)
996637.SGM_4365(PF13560)
996637.SGM_4899(PF08242)
996637.SGM_3819(PF07884)
996637.SGM_2490(PF12740)
996637.SGM_1417(PF04471)
996637.SGM_0236(PF13602)
996637.SGM_1061(PF01453)
996637.SGM_2863(PF13560)
996637.SGM_0420(PF13560)
996637.SGM_0686(PF01580)
996637.SGM_0216(PF13560)
996637.SGM_4540(PF13560)
996637.SGM_1982(PF03029)
996637.SGM_6102(PF13499)
996637.SGM_0768(PF13602)
996637.SGM_1112(PF13602)
996637.SGM_0396(PF13602)
996637.SGM_5615(PF13560)
996637.SGM_5282(PF02403)
996637.SGM_5217(PF08242)
996637.SGM_2558(PF05719)
996637.SGM_6070(PF01839)
996637.SGM_1396(PF13560)
996637.SGM_1390(PF03457)
996637.SGM_1976(PF03259)
996637.SGM_1978(PF03029)
996637.SGM_1230(PF13560)
996637.SGM_2574(PF13560)
996637.SGM_4194(PF13602)
996637.SGM_4990(PF03259)
996637.SGM_0883(PF13560)
996637.SGM_6621(PF08242)
996637.SGM_2461(PF13560)
996637.SGM_5167(PF03259)
996637.SGM_4564(PF13560)
996637.SGM_6441(PF13560)
996637.SGM_0120(PF13560)
996637.SGM_2449(PF13499)
996637.SGM_5147(PF13602)
996637.SGM_6197(PF13560)
996637.SGM_2425(PF13560)
996637.SGM_4536(PF03259)
996637.SGM_4538(PF03029)
996637.SGM_3292(PF13560)
996637.SGM_6246(PF13602)
996637.SGM_3150PF00416
996637.SGM_3401(PF01427)
996637.SGM_4664(PF01987)
996637.SGM_4663(PF01987)
996637.SGM_4662(PF01987)
996637.SGM_4918(PF13560)
996637.SGM_3052(PF13560)
996637.SGM_6053(PF13560)
996637.SGM_3941(PF03259)
996637.SGM_6641PF16808
996637.SGM_0148(PF13560)
996637.SGM_6720(PF14378)
996637.SGM_2174(PF03803)
996637.SGM_2177(PF14378)
996637.SGM_5252(PF01427)
996637.SGM_1830(PF01580)
996637.SGM_5393(PF01987)
996637.SGM_2111(PF11977)
996637.SGM_2117(PF13560)
996637.SGM_0264(PF13602)
996637.SGM_1720(PF01580)
996637.SGM_2638(PF13560)
996637.SGM_3510(PF00643)
996637.SGM_0372(PF13602)
996637.SGM_0622(PF13560)
996637.SGM_0653(PF03807)
996637.SGM_5971(PF03029)
996637.SGM_2488(PF08242)
996637.SGM_3727(PF03259)
996637.SGM_3725(PF03029)
996637.SGM_2677(PF13560)
996637.SGM_5408(PF08242)
996637.SGM_5404(PF01073)
996637.SGM_6815(PF13560)
996637.SGM_1408(PF03457)
996637.SGM_0757(PF14330)
996637.SGM_4120(PF13560)
996637.SGM_0430(PF13560)
996637.SGM_0435(PF13602)
996637.SGM_1341(PF13560)
996637.SGM_0697(PF14378)
996637.SGM_6697(PF13602)
996637.SGM_1648(PF13560)
996637.SGM_0776(PF03259)
996637.SGM_0636(PF13560)
996637.SGM_0147(PF13560)
996637.SGM_4455(PF01987)
996637.SGM_3594(PF02403)
996637.SGM_0575(PF14378)
996637.SGM_4392(PF13602)
996637.SGM_6413(PF03259)
996637.SGM_0710(PF13560)
996637.SGM_5875(PF03259)
996637.SGM_5600(PF13499)
996637.SGM_2956(PF13560)
996637.SGM_2953(PF13602)
996637.SGM_3626(PF13602)
996637.SGM_1489(PF13560)
996637.SGM_1220(PF13560)
996637.SGM_2567(PF13602)
996637.SGM_2234(PF13560)
996637.SGM_5136(PF05719)
996637.SGM_4519(PF13602)
996637.SGM_1207(PF13560)
996637.SGM_4988(PF03029)
996637.SGM_0093(PF03807)
996637.SGM_2934(PF14378)
996637.SGM_2065(PF13499)
996637.SGM_0778(PF03029)
996637.SGM_3793PF00416
996637.SGM_4453(PF01987)
996637.SGM_4454(PF01987)
996637.SGM_3266(PF03029)
996637.SGM_3264(PF03259)
996637.SGM_4698(PF13560)
996637.SGM_4925(PF03807)
996637.SGM_1980(PF03259)
996637.SGM_2887(PF13560)
996637.SGM_1756(PF13560)
996637.SGM_3931(PF13560)
996637.SGM_3939(PF03029)
996637.SGM_2083(PF13602)
996637.SGM_0158(PF01453)
996637.SGM_5057(PF13560)
996637.SGM_4672(PF13560)
996637.SGM_4010(PF13560)
996637.SGM_6081(PF13560)
996637.SGM_2603(PF13560)
996637.SGM_5070(PF13560)
996637.SGM_2385(PF13560)
996637.SGM_2161(PF13602)
996637.SGM_1125(PF13560)
996637.SGM_2593(PF13602)
996637.SGM_2627(PF01987)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================