Genomes encoding eukaryotic-like proteins
PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
Copy number in non-pathogens:
Mean=0.99 Stddev=1.66
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Nocardia yamanashiensis NBRC 100130 | s | 4 | 9 |
| Nocardia mexicana NBRC 108244 | s | 4 | 8 |
| Nocardia seriolae | s | 4 | 8 |
| Nocardia seriolae | s | 4 | 9 |
| Nocardia crassostreae | s | 5 | 10 |
| Nocardia concava NBRC 100430 | s | 4 | 8 |
| Nocardia tenerifensis NBRC 101015 | s | 4 | 8 |
| Actinomadura chibensis NBRC 106107 | s | 4 | 9 |
| Nocardia brasiliensis ATCC 700358 | p | 10 | 18 |
| Amycolatopsis jejuensis | s | 6 | 11 |
| Nocardia seriolae | s | 4 | 9 |
| Streptomyces griseus | s | 4 | 8 |
| Streptomyces sp. 96-12 | s | 4 | 8 |
| Nocardia seriolae | s | 4 | 8 |
| Nocardia seriolae | s | 4 | 9 |
| Streptomyces rhizosphaericus | s | 5 | 10 |
| Amycolatopsis kentuckyensis | s | 4 | 8 |
| Amycolatopsis lexingtonensis | s | 4 | 8 |
| Amycolatopsis pretoriensis | s | 4 | 8 |
| Lentzea kentuckyensis | s | 4 | 8 |
| Nocardia seriolae | s | 4 | 8 |
| Streptomyces scabiei | s | 4 | 8 |
*p=pathogen;s=symbiont
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