Effective results for Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 (eggnog40)

Summary

Number of putative secreted proteins: 63
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 14 eukaryotic-like domains, contained in 63 proteins (6 high, 57 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
1048834.TC41_2958(PF12323)(mitochondrial)
1048834.TC41_1045(PF13276)(mitochondrial)
1048834.TC41_1043(PF13276)mitochondrial
1048834.TC41_1837(PF13276)(mitochondrial)
1048834.TC41_1839(PF13276)mitochondrial
1048834.TC41_1441(PF13276)(mitochondrial)
1048834.TC41_0039(PF12323)(mitochondrial)
1048834.TC41_0859(PF12323)(mitochondrial)
1048834.TC41_0853(PF12323)(mitochondrial)
1048834.TC41_0300(PF12323)(mitochondrial)
1048834.TC41_0304PF08389ER; (ER)
1048834.TC41_0793(PF01969)(ER)
1048834.TC41_0663(PF12323)(mitochondrial); mitochondrial
1048834.TC41_1115(PF13276)mitochondrial
1048834.TC41_1100(PF13276)(mitochondrial)
1048834.TC41_1102(PF13276)mitochondrial
1048834.TC41_1215(PF13276)mitochondrial
1048834.TC41_2475PF01828ER
1048834.TC41_0645(PF12323)(mitochondrial)
1048834.TC41_0423(PF12323)(mitochondrial)
1048834.TC41_3188PF01828ER; (ER)
1048834.TC41_2291(PF02681)ER
1048834.TC41_3226(PF12323)(mitochondrial)
1048834.TC41_0755(PF09992)ER
1048834.TC41_1807(PF13276)(mitochondrial)
1048834.TC41_2380(PF12224)plastid
1048834.TC41_2414(PF12323)(mitochondrial)
1048834.TC41_2741PF01828plastid
1048834.TC41_1762(PF09992)(plastid)
1048834.TC41_1711(PF12224)plastid
1048834.TC41_2723(PF02679)
1048834.TC41_0150(PF03050)
1048834.TC41_0151(PF03050)
1048834.TC41_1048(PF03050)
1048834.TC41_2426(PF09992)
1048834.TC41_0022(PF03050)
1048834.TC41_0561(PF13921)
1048834.TC41_2979(PF03050)
1048834.TC41_1843(PF03050)
1048834.TC41_2986(PF03050)
1048834.TC41_1859PF00627
1048834.TC41_1187(PF13921)
1048834.TC41_2379(PF06094)
1048834.TC41_2994(PF03050)
1048834.TC41_1083(PF02681)
1048834.TC41_1795(PF06094)
1048834.TC41_1797(PF03050)
1048834.TC41_1228(PF02679)
1048834.TC41_2324PF01828
1048834.TC41_0863(PF09992)
1048834.TC41_0799(PF01969)
1048834.TC41_0792(PF01969)
1048834.TC41_0403(PF08950)
1048834.TC41_1114(PF03050)
1048834.TC41_1779(PF06094)
1048834.TC41_0633(PF09992)
1048834.TC41_1378(PF06094)
1048834.TC41_0374(PF03050)
1048834.TC41_1710(PF06094)
1048834.TC41_2446(PF06094)
1048834.TC41_1818(PF03050)
1048834.TC41_1497(PF09992)
1048834.TC41_1816(PF03050)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================