Effective results for Pseudomonas fluorescens F113 (eggnog40)

Summary

Number of putative secreted proteins: 854
- Predicted by EffectiveT3: 213 (high confidence), 374 (low confidence)
- Predicted by EffectiveCCBD: 23 within, 16 before, 53 behind expected region 25..70aa
- Predicted by T4SEpre: 128
- Predicted by EffectiveELD: 33 eukaryotic-like domains, contained in 103 proteins (4 high, 99 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, (Type IV), Type VI

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
1114970.PSF113_3166+(PF05593)ER
1114970.PSF113_5355+(PF00639)ER
1114970.PSF113_2479+ER
1114970.PSF113_0510(PF06293)(ER)
1114970.PSF113_1971+ER
1114970.PSF113_2117(<)ER
1114970.PSF113_0236+ER
1114970.PSF113_5856+ER
1114970.PSF113_2492+(mitochondrial)
1114970.PSF113_0876PF04576mitochondrial
1114970.PSF113_2700+ER
1114970.PSF113_1398+ER
1114970.PSF113_1254(<)(ER)
1114970.PSF113_2723+ER
1114970.PSF113_2721+ER
1114970.PSF113_4631(<)ER
1114970.PSF113_3119+ER
1114970.PSF113_2962+ER
1114970.PSF113_3686+ER
1114970.PSF113_4404(>)(mitochondrial); mitochondrial
1114970.PSF113_1717+(ER)
1114970.PSF113_3370(PF14870)(ER)
1114970.PSF113_3317+ER
1114970.PSF113_2046+(mitochondrial)
1114970.PSF113_5069+(ER)
1114970.PSF113_4083+ER
1114970.PSF113_1590(>)ER
1114970.PSF113_5594+mitochondrial
1114970.PSF113_0673+ER
1114970.PSF113_4046+(ER)
1114970.PSF113_2630(PF00639)ER
1114970.PSF113_3738(>)ER
1114970.PSF113_5086+(ER)
1114970.PSF113_1709(>)ER
1114970.PSF113_1065(PF14821)(ER)
1114970.PSF113_3754(PF02239)mitochondrial
1114970.PSF113_3751(PF02239)ER
1114970.PSF113_1983(>)ER
1114970.PSF113_2986(PF02239)mitochondrial
1114970.PSF113_3581(PF14330)(mitochondrial)
1114970.PSF113_2593(>)mitochondrial; ER
1114970.PSF113_4490+(ER)
1114970.PSF113_3773(>)(ER)
1114970.PSF113_1046+mitochondrial
1114970.PSF113_0958+ER
1114970.PSF113_3794+ER
1114970.PSF113_3959(>)ER
1114970.PSF113_0972(<)ER
1114970.PSF113_2699+ER
1114970.PSF113_2695+ER; (plastid)
1114970.PSF113_0735+ER
1114970.PSF113_5863+ER
1114970.PSF113_3859(>)ER
1114970.PSF113_3641(PF14870)ER
1114970.PSF113_3670+ER
1114970.PSF113_5631(>)ER
1114970.PSF113_4418+(mitochondrial); (plastid)
1114970.PSF113_3870(PF16952)ER
1114970.PSF113_3128+ER
1114970.PSF113_2836+ER
1114970.PSF113_2830(>)ER
1114970.PSF113_2388+ER
1114970.PSF113_4292+(mitochondrial); (plastid)
1114970.PSF113_0263+(mitochondrial)
1114970.PSF113_1417+ER
1114970.PSF113_1084+ER
1114970.PSF113_1883+ER
1114970.PSF113_4809+(mitochondrial)
1114970.PSF113_4319(+)(>)mitochondrial; (mitochondrial)
1114970.PSF113_2562+(mitochondrial)
1114970.PSF113_2954(PF14870)ER
1114970.PSF113_3558+ER
1114970.PSF113_1304(PF01823)(mitochondrial)
1114970.PSF113_1170(PF04862)ER
1114970.PSF113_5246+ER
1114970.PSF113_5248+mitochondrial
1114970.PSF113_4049(>)ER
1114970.PSF113_2052+mitochondrial; plastid
1114970.PSF113_2580(PF14870)(mitochondrial)
1114970.PSF113_1773(PF04324)(ER)
1114970.PSF113_1342+(ER)
1114970.PSF113_4397+(PF05593)(plastid)
1114970.PSF113_4915+mitochondrial
1114970.PSF113_3165(PF05593)ER
1114970.PSF113_3744(PF02239)ER
1114970.PSF113_5560+ER
1114970.PSF113_4264(<)ER
1114970.PSF113_3909+ER
1114970.PSF113_1196+ER
1114970.PSF113_4015(>)ER
1114970.PSF113_4609+ER
1114970.PSF113_4461+ER
1114970.PSF113_3968(>)mitochondrial
1114970.PSF113_0925+ER
1114970.PSF113_2159+ER
1114970.PSF113_3419+ER
1114970.PSF113_4059+ER
1114970.PSF113_3086(<)ER
1114970.PSF113_3432(>)ER
1114970.PSF113_5873(+)(ER)
1114970.PSF113_0513(+)(mitochondrial)
1114970.PSF113_3603(PF09347)(mitochondrial)
1114970.PSF113_5460+(ER)
1114970.PSF113_2806(PF04324)(ER)
1114970.PSF113_4405+(plastid)
1114970.PSF113_4844+(mitochondrial)
1114970.PSF113_3665(+)mitochondrial; (mitochondrial)
1114970.PSF113_2825(+)(mitochondrial)
1114970.PSF113_0270(>)(mitochondrial)
1114970.PSF113_2966(>)(PF07287)
1114970.PSF113_5215++
1114970.PSF113_4302+plastid
1114970.PSF113_2881(+)mitochondrial
1114970.PSF113_2209(+)+(PF08787)
1114970.PSF113_5067(+)(mitochondrial); (plastid)
1114970.PSF113_4360+(plastid)
1114970.PSF113_5718(PF01678)(mitochondrial)
1114970.PSF113_3017+(plastid)
1114970.PSF113_2635++(plastid)
1114970.PSF113_3251+(plastid)
1114970.PSF113_5574++
1114970.PSF113_2403(+)PF12255 (PF12256)
1114970.PSF113_2402+(plastid)
1114970.PSF113_2401+(plastid)
1114970.PSF113_0630+plastid
1114970.PSF113_4600(+)ER
1114970.PSF113_2365(+)mitochondrial
1114970.PSF113_3912(PF00639)(ER)
1114970.PSF113_4823+(plastid)
1114970.PSF113_4064+(plastid)
1114970.PSF113_1536+(mitochondrial)
1114970.PSF113_3977(+)(mitochondrial); (plastid)
1114970.PSF113_4212+plastid
1114970.PSF113_0774(+)(mitochondrial)
1114970.PSF113_3898(PF13510)(ER)
1114970.PSF113_3891(+)(ER)
1114970.PSF113_1554+plastid
1114970.PSF113_4453+plastid
1114970.PSF113_3328(+)(ER)
1114970.PSF113_5801+(PF14113)
1114970.PSF113_3053(>)+
1114970.PSF113_0698(>)(ER)
1114970.PSF113_1571+plastid
1114970.PSF113_0732PF12255 (PF12256)
1114970.PSF113_0846(+)ER; (ER)
1114970.PSF113_1030+(plastid)
1114970.PSF113_2710(+)ER; (ER)
1114970.PSF113_3382(>)(mitochondrial)
1114970.PSF113_4109+(PF03692)
1114970.PSF113_0324b+plastid
1114970.PSF113_0772(>)(ER)
1114970.PSF113_0777+(plastid)
1114970.PSF113_0776+plastid
1114970.PSF113_0775+(mitochondrial)
1114970.PSF113_5204(PF05593)(ER)
1114970.PSF113_2899(+)+(PF04444)
1114970.PSF113_2661+(ER)
1114970.PSF113_3982(+)ER; (ER)
1114970.PSF113_2273(+)mitochondrial; plastid
1114970.PSF113_2755+(>)
1114970.PSF113_0648(>)+
1114970.PSF113_4562(+)ER; (ER)
1114970.PSF113_3728(PF13510)(plastid)
1114970.PSF113_0065(+)ER
1114970.PSF113_2605(+)mitochondrial; (mitochondrial)
1114970.PSF113_3922(PF02882)(plastid)
1114970.PSF113_1240(+)ER; (ER)
1114970.PSF113_0902(+)ER
1114970.PSF113_0090+(plastid)
1114970.PSF113_5503(+)(ER)
1114970.PSF113_4466(PF13332)(mitochondrial)
1114970.PSF113_0927(<)+
1114970.PSF113_5113(+)(mitochondrial); plastid
1114970.PSF113_0768(+)(ER)
1114970.PSF113_3414(>)(mitochondrial)
1114970.PSF113_5106(>)(plastid)
1114970.PSF113_1954(PF10142)(ER)
1114970.PSF113_5875+
1114970.PSF113_2805(PF13510)
1114970.PSF113_0234+
1114970.PSF113_4669(+)(plastid)
1114970.PSF113_2357+
1114970.PSF113_0531+
1114970.PSF113_0536(+)(>)
1114970.PSF113_4846+
1114970.PSF113_4361(PF05593)
1114970.PSF113_1629(+)(PF14518)
1114970.PSF113_3849+
1114970.PSF113_3846+
1114970.PSF113_2823(PF04324)
1114970.PSF113_5444(+)(plastid)
1114970.PSF113_5621+
1114970.PSF113_0879+
1114970.PSF113_4828+
1114970.PSF113_3472+
1114970.PSF113_3475+
1114970.PSF113_5168(>)
1114970.PSF113_1395(PF09347)
1114970.PSF113_4347(>)
1114970.PSF113_0112+
1114970.PSF113_0114+
1114970.PSF113_3643+
1114970.PSF113_5428+
1114970.PSF113_5394+
1114970.PSF113_5393+
1114970.PSF113_5148a+
1114970.PSF113_4119(+)(plastid)
1114970.PSF113_0275+
1114970.PSF113_0078+
1114970.PSF113_0852+
1114970.PSF113_4020+
1114970.PSF113_2728+
1114970.PSF113_4243(+)(mitochondrial)
1114970.PSF113_0047(+)(ER)
1114970.PSF113_4939+
1114970.PSF113_3803+
1114970.PSF113_1662(PF09347)
1114970.PSF113_1337+
1114970.PSF113_2577+
1114970.PSF113_2575+
1114970.PSF113_1871(PF01678)
1114970.PSF113_4132(>)
1114970.PSF113_4134+
1114970.PSF113_0839+
1114970.PSF113_3560+
1114970.PSF113_0317+
1114970.PSF113_0311+
1114970.PSF113_2345+
1114970.PSF113_2347(>)
1114970.PSF113_4502+
1114970.PSF113_3822+
1114970.PSF113_1680+
1114970.PSF113_3175+
1114970.PSF113_5681+
1114970.PSF113_5024(>)
1114970.PSF113_5029+
1114970.PSF113_1854(PF05593)
1114970.PSF113_1853+
1114970.PSF113_4841(PF03692)
1114970.PSF113_4848+
1114970.PSF113_4518+not used
1114970.PSF113_2944(>)
1114970.PSF113_5234+
1114970.PSF113_1449(PF03692)
1114970.PSF113_2205+
1114970.PSF113_2208(+)(plastid)
1114970.PSF113_1789(PF07720)
1114970.PSF113_1167+
1114970.PSF113_1168+
1114970.PSF113_3529(PF02882)
1114970.PSF113_3526(PF13510)
1114970.PSF113_3521+
1114970.PSF113_2922+
1114970.PSF113_2923(PF03692)
1114970.PSF113_5257+
1114970.PSF113_4921(PF03692)
1114970.PSF113_1310(+)plastid
1114970.PSF113_0372(+)(mitochondrial)
1114970.PSF113_0974(PF14113)
1114970.PSF113_0993(+)(PF08357)
1114970.PSF113_0991+
1114970.PSF113_3314+
1114970.PSF113_5068+
1114970.PSF113_5064+
1114970.PSF113_4084(PF01678)
1114970.PSF113_1108+
1114970.PSF113_1103(>)
1114970.PSF113_4889+not used
1114970.PSF113_4882+
1114970.PSF113_5909+
1114970.PSF113_1374+
1114970.PSF113_1597+
1114970.PSF113_3336+
1114970.PSF113_5592+
1114970.PSF113_2243(PF04324)
1114970.PSF113_2242(PF13510)
1114970.PSF113_1299+
1114970.PSF113_1745(PF07287)
1114970.PSF113_4142+
1114970.PSF113_4715+
1114970.PSF113_4716+
1114970.PSF113_0241+
1114970.PSF113_1352+
1114970.PSF113_0409+
1114970.PSF113_0408+
1114970.PSF113_2002(<)
1114970.PSF113_0079a+
1114970.PSF113_1396+
1114970.PSF113_5719+
1114970.PSF113_5714+
1114970.PSF113_1728+
1114970.PSF113_0589(>)
1114970.PSF113_4001+
1114970.PSF113_3012+
1114970.PSF113_5363+
1114970.PSF113_2029+
1114970.PSF113_2027+
1114970.PSF113_2287+
1114970.PSF113_5777(+)(mitochondrial)
1114970.PSF113_5770(+)(plastid)
1114970.PSF113_1259+
1114970.PSF113_1704+
1114970.PSF113_3580(PF07287)
1114970.PSF113_0912+
1114970.PSF113_5572+
1114970.PSF113_2409+
1114970.PSF113_5757+
1114970.PSF113_5754+
1114970.PSF113_1273+
1114970.PSF113_1182+
1114970.PSF113_1436+
1114970.PSF113_1926PF01363
1114970.PSF113_4003+
1114970.PSF113_0055+
1114970.PSF113_3588(+)(PF14330)
1114970.PSF113_3587(PF07287)
1114970.PSF113_2368(PF04324)
1114970.PSF113_2367(PF13510)
1114970.PSF113_4565+
1114970.PSF113_4499+
1114970.PSF113_4270+
1114970.PSF113_2424+
1114970.PSF113_4062+
1114970.PSF113_4069+
1114970.PSF113_4011(+)+
1114970.PSF113_3219+
1114970.PSF113_3211+
1114970.PSF113_3213(+)(ER)
1114970.PSF113_3212+
1114970.PSF113_2306+
1114970.PSF113_0934+
1114970.PSF113_2384+
1114970.PSF113_5653+
1114970.PSF113_0455b(>)
1114970.PSF113_1028+
1114970.PSF113_1532(+)(mitochondrial)
1114970.PSF113_1531+
1114970.PSF113_4217+
1114970.PSF113_2448+
1114970.PSF113_5794+
1114970.PSF113_1490(PF13332)
1114970.PSF113_1493+
1114970.PSF113_1942(>)
1114970.PSF113_0019+
1114970.PSF113_3899(PF04324)
1114970.PSF113_3092+
1114970.PSF113_3091(+)(>)
1114970.PSF113_4885(+)(<)
1114970.PSF113_4887(<)
1114970.PSF113_4452+
1114970.PSF113_4456(>)
1114970.PSF113_4458+
1114970.PSF113_4953+
1114970.PSF113_0755+
1114970.PSF113_0754+
1114970.PSF113_4988(+)(mitochondrial)
1114970.PSF113_0204+
1114970.PSF113_3407+
1114970.PSF113_5809(PF05593)
1114970.PSF113_3324(+)(mitochondrial)
1114970.PSF113_2466+
1114970.PSF113_2469(PF03538)
1114970.PSF113_1420+
1114970.PSF113_5117+
1114970.PSF113_1394(PF09347)
1114970.PSF113_0565+
1114970.PSF113_1967+
1114970.PSF113_1618+
1114970.PSF113_4610+
1114970.PSF113_4613(+)(>)
1114970.PSF113_5479(+)(PF08787)
1114970.PSF113_5615+
1114970.PSF113_5610+
1114970.PSF113_0734(PF03538)
1114970.PSF113_3429+
1114970.PSF113_0740+
1114970.PSF113_2489(PF14870)
1114970.PSF113_2482+
1114970.PSF113_0746+
1114970.PSF113_5131+
1114970.PSF113_0507(PF06293)
1114970.PSF113_0508(PF06293)
1114970.PSF113_0509(PF06293)
1114970.PSF113_1906+
1114970.PSF113_2102+
1114970.PSF113_3678(>)
1114970.PSF113_3677+
1114970.PSF113_5639+
1114970.PSF113_4414+
1114970.PSF113_3444(+)(PF04444)
1114970.PSF113_5846(>)
1114970.PSF113_5842+
1114970.PSF113_0522(+)(mitochondrial)
1114970.PSF113_0381(+)(mitochondrial)
1114970.PSF113_3384+
1114970.PSF113_3380+
1114970.PSF113_5432(PF13510)
1114970.PSF113_5438+
1114970.PSF113_4837(>)
1114970.PSF113_0641(>)
1114970.PSF113_2737+
1114970.PSF113_5174+
1114970.PSF113_5170(PF08732)
1114970.PSF113_5179+
1114970.PSF113_3812(+)(plastid)
1114970.PSF113_3100+
1114970.PSF113_4819+
1114970.PSF113_2758(PF14821)
1114970.PSF113_5731+
1114970.PSF113_1472+
1114970.PSF113_3830+
1114970.PSF113_0002+
1114970.PSF113_0005+
1114970.PSF113_1698+
1114970.PSF113_1696+
1114970.PSF113_4640+
1114970.PSF113_3343+
1114970.PSF113_3169(PF13510)
1114970.PSF113_1793+
1114970.PSF113_2564+
1114970.PSF113_4128+
1114970.PSF113_0770+
1114970.PSF113_4871+
1114970.PSF113_0802(+)+
1114970.PSF113_3572+
1114970.PSF113_3578(>)
1114970.PSF113_5200(PF14821)
1114970.PSF113_0095(+)(PF03162)
1114970.PSF113_1451+
1114970.PSF113_4392+
1114970.PSF113_2546+
1114970.PSF113_0294+
1114970.PSF113_0793(PF13332)
1114970.PSF113_1848+
1114970.PSF113_4507+
1114970.PSF113_5827+
1114970.PSF113_3559+
1114970.PSF113_2936(PF14518)
1114970.PSF113_5223+
1114970.PSF113_5227(+)(mitochondrial)
1114970.PSF113_1305(<)
1114970.PSF113_5837+
1114970.PSF113_1923+
1114970.PSF113_2216(>)
1114970.PSF113_3702+
1114970.PSF113_1796(<)
1114970.PSF113_1792(>)
1114970.PSF113_1791(>)
1114970.PSF113_4526+
1114970.PSF113_3539(PF09347)
1114970.PSF113_3534+
1114970.PSF113_3537(PF02882)
1114970.PSF113_2911(PF14518)
1114970.PSF113_5243+
1114970.PSF113_0947+
1114970.PSF113_1368+
1114970.PSF113_1012(>)
1114970.PSF113_1581+
1114970.PSF113_1580+
1114970.PSF113_1587+
1114970.PSF113_0368(PF03692)
1114970.PSF113_0187+
1114970.PSF113_0987+
1114970.PSF113_4959+
1114970.PSF113_3321+
1114970.PSF113_0757+
1114970.PSF113_2054+
1114970.PSF113_5588+
1114970.PSF113_1771(PF04324)
1114970.PSF113_4542(+)(PF06293)
1114970.PSF113_5269+
1114970.PSF113_2256(+)+
1114970.PSF113_5700+
1114970.PSF113_0941+
1114970.PSF113_1134+
1114970.PSF113_4568(PF04324)
1114970.PSF113_3067+
1114970.PSF113_0415+
1114970.PSF113_2011+
1114970.PSF113_1738(>)
1114970.PSF113_3268+
1114970.PSF113_3269+
1114970.PSF113_3267(PF00639)
1114970.PSF113_0607(+)+
1114970.PSF113_1956+
1114970.PSF113_4056+
1114970.PSF113_0297+
1114970.PSF113_3924+
1114970.PSF113_2034+
1114970.PSF113_2035(PF04444)
1114970.PSF113_2031(PF04444)
1114970.PSF113_3749+
1114970.PSF113_3741+
1114970.PSF113_5564+
1114970.PSF113_2295+
1114970.PSF113_5745+
1114970.PSF113_5749+
1114970.PSF113_5748(+)(PF03692)
1114970.PSF113_1719+
1114970.PSF113_0596(<)
1114970.PSF113_4742+
1114970.PSF113_2990(>)
1114970.PSF113_2992+
1114970.PSF113_2371+
1114970.PSF113_0450+
1114970.PSF113_0451+
1114970.PSF113_1054+
1114970.PSF113_1503+
1114970.PSF113_3761+
1114970.PSF113_0091+
1114970.PSF113_2416+
1114970.PSF113_1996+
1114970.PSF113_0028+
1114970.PSF113_0674+
1114970.PSF113_3220(>)
1114970.PSF113_3596(PF14518)
1114970.PSF113_3595(<)
1114970.PSF113_3592(>)
1114970.PSF113_2318+
1114970.PSF113_5338(<)
1114970.PSF113_1522+
1114970.PSF113_3783(PF00639)
1114970.PSF113_3780(<)
1114970.PSF113_3786+not used
1114970.PSF113_2784+
1114970.PSF113_4650+
1114970.PSF113_1205+
1114970.PSF113_1200+
1114970.PSF113_2153(PF13510)
1114970.PSF113_2337(PF16485)
1114970.PSF113_5645(+)+
1114970.PSF113_1545+
1114970.PSF113_0760+
1114970.PSF113_5815+
1114970.PSF113_5811(PF05593)
1114970.PSF113_1483+
1114970.PSF113_0572+
1114970.PSF113_3082(PF14518)
1114970.PSF113_2133(+)(plastid)
1114970.PSF113_3623+
1114970.PSF113_3624+
1114970.PSF113_5480(+)(PF08787)
1114970.PSF113_5481+
1114970.PSF113_2863+
1114970.PSF113_5663+
1114970.PSF113_5661+
1114970.PSF113_2873(+)
1114970.PSF113_1976(+)
1114970.PSF113_1608(+)
1114970.PSF113_2111(+)
1114970.PSF113_3609(+)
1114970.PSF113_3602(+)
1114970.PSF113_3601(+)
1114970.PSF113_2807(+)
1114970.PSF113_0725(+)
1114970.PSF113_3459(+)
1114970.PSF113_5859(+)
1114970.PSF113_0321(+)
1114970.PSF113_0758(+)
1114970.PSF113_5142(+)
1114970.PSF113_0537(+)
1114970.PSF113_5884(+)
1114970.PSF113_2399(+)
1114970.PSF113_2871(+)
1114970.PSF113_2532(+)
1114970.PSF113_2534(+)
1114970.PSF113_5624(+)
1114970.PSF113_4171(+)
1114970.PSF113_4173(+)
1114970.PSF113_0259(+)
1114970.PSF113_3474(+)
1114970.PSF113_4079(+)
1114970.PSF113_5164(+)
1114970.PSF113_0224(+)
1114970.PSF113_0222(+)
1114970.PSF113_3396(+)
1114970.PSF113_3397(+)
1114970.PSF113_2519(+)
1114970.PSF113_1892(+)
1114970.PSF113_4751(+)
1114970.PSF113_4754(+)
1114970.PSF113_5188(+)
1114970.PSF113_4936(+)
1114970.PSF113_3808(+)
1114970.PSF113_4321(+)
1114970.PSF113_4323(+)
1114970.PSF113_3114(+)
1114970.PSF113_2574(+)
1114970.PSF113_1873(+)
1114970.PSF113_1870(+)
1114970.PSF113_1874(+)
1114970.PSF113_4130(+)
1114970.PSF113_4795(+)
1114970.PSF113_3569(+)
1114970.PSF113_2305(+)
1114970.PSF113_1466(+)
1114970.PSF113_1682(+)
1114970.PSF113_1687(+)
1114970.PSF113_3355(+)
1114970.PSF113_3170(+)
1114970.PSF113_3683(+)
1114970.PSF113_4403(+)
1114970.PSF113_4519(+)
1114970.PSF113_2949(+)
1114970.PSF113_0170(+)
1114970.PSF113_3377(+)
1114970.PSF113_3375(+)
1114970.PSF113_3123(+)
1114970.PSF113_1831(+)
1114970.PSF113_1788(+)
1114970.PSF113_0599(+)
1114970.PSF113_3525(+)
1114970.PSF113_2928(+)
1114970.PSF113_5258(+)
1114970.PSF113_4253(+)
1114970.PSF113_0378(+)
1114970.PSF113_0198(+)
1114970.PSF113_0197(+)
1114970.PSF113_0195(+)
1114970.PSF113_2269(+)
1114970.PSF113_4086(+)
1114970.PSF113_4730(+)
1114970.PSF113_3502(+)
1114970.PSF113_3509(+)
1114970.PSF113_1370(+)
1114970.PSF113_1596(+)
1114970.PSF113_4940(+)
1114970.PSF113_3334(+)
1114970.PSF113_3197(+)
1114970.PSF113_3198(+)
1114970.PSF113_2249(+)
1114970.PSF113_3296(+)
1114970.PSF113_0652(+)
1114970.PSF113_0654(+)
1114970.PSF113_0656(+)
1114970.PSF113_3077(+)
1114970.PSF113_0243(+)
1114970.PSF113_3712(+)
1114970.PSF113_3719(+)
1114970.PSF113_5256(+)
1114970.PSF113_0094(+)
1114970.PSF113_0586(+)
1114970.PSF113_0899(+)
1114970.PSF113_3011(+)
1114970.PSF113_0909(+)
1114970.PSF113_3485(+)
1114970.PSF113_3731(+)
1114970.PSF113_5085(+)
1114970.PSF113_0613(+)
1114970.PSF113_5347(+)
1114970.PSF113_0446(+)
1114970.PSF113_0911(+)
1114970.PSF113_5755(+)
1114970.PSF113_1271(+)
1114970.PSF113_1927(+)
1114970.PSF113_0584(+)
1114970.PSF113_0638(+)
1114970.PSF113_2362(+)
1114970.PSF113_2592(+)
1114970.PSF113_4274(+)
1114970.PSF113_2422(+)
1114970.PSF113_4061(+)
1114970.PSF113_1041(+)
1114970.PSF113_4272(+)
1114970.PSF113_0933(+)
1114970.PSF113_1537(+)
1114970.PSF113_1763(+)
1114970.PSF113_2446(+)
1114970.PSF113_2443(+)
1114970.PSF113_2442(+)
1114970.PSF113_5799(+)
1114970.PSF113_1941(+)
1114970.PSF113_4736(+)
1114970.PSF113_3093(+)
1114970.PSF113_3638(+)
1114970.PSF113_1557(+)
1114970.PSF113_4450(+)
1114970.PSF113_3325(+)
1114970.PSF113_3054(+)
1114970.PSF113_1042(+)
1114970.PSF113_2122(+)
1114970.PSF113_5470(+)
1114970.PSF113_2698(+)
1114970.PSF113_5271(+)
1114970.PSF113_1453(+)
1114970.PSF113_5132(+)
1114970.PSF113_5136(+)
1114970.PSF113_5052(+)
1114970.PSF113_4065(+)
1114970.PSF113_1639(+)
1114970.PSF113_3852(+)
1114970.PSF113_3855(+)
1114970.PSF113_2101(+)
1114970.PSF113_0863(+)
1114970.PSF113_2712(+)
1114970.PSF113_2714(+)
1114970.PSF113_1777(+)
1114970.PSF113_5151(+)
1114970.PSF113_4354(+)
1114970.PSF113_0320(+)
1114970.PSF113_0357(+)
1114970.PSF113_2837(+)
1114970.PSF113_5431(+)
1114970.PSF113_2523(+)
1114970.PSF113_5387(+)
1114970.PSF113_4294(+)
1114970.PSF113_0266(+)
1114970.PSF113_4833(+)
1114970.PSF113_2735(+)
1114970.PSF113_3994(+)not used
1114970.PSF113_5650(+)
1114970.PSF113_3816(+)
1114970.PSF113_4334(+)
1114970.PSF113_1674(+)
1114970.PSF113_3106(+)
1114970.PSF113_0312(+)not used
1114970.PSF113_2507(+)
1114970.PSF113_1087(+)
1114970.PSF113_1887(+)
1114970.PSF113_1881(+)
1114970.PSF113_1889(+)
1114970.PSF113_0324a(+)
1114970.PSF113_5914(+)
1114970.PSF113_5917(+)
1114970.PSF113_2751(+)
1114970.PSF113_5190(+)
1114970.PSF113_5195(+)
1114970.PSF113_3831(+)
1114970.PSF113_0003(+)
1114970.PSF113_1692(+)
1114970.PSF113_3342(+)
1114970.PSF113_3341(+)
1114970.PSF113_0125(+)
1114970.PSF113_0805(+)
1114970.PSF113_3575(+)
1114970.PSF113_3577(+)
1114970.PSF113_2958(+)
1114970.PSF113_1455(+)not used
1114970.PSF113_0496(+)
1114970.PSF113_4393(+)
1114970.PSF113_2092(+)
1114970.PSF113_2093(+)
1114970.PSF113_2540(+)
1114970.PSF113_0795(+)
1114970.PSF113_0797(+)
1114970.PSF113_4501(+)
1114970.PSF113_4578(+)
1114970.PSF113_5225(+)
1114970.PSF113_1300(+)
1114970.PSF113_3300(+)
1114970.PSF113_1829(+)
1114970.PSF113_1178(+)
1114970.PSF113_4812(+)
1114970.PSF113_3538(+)
1114970.PSF113_3535(+)
1114970.PSF113_2669(+)
1114970.PSF113_2668(+)
1114970.PSF113_5244(+)
1114970.PSF113_0183(+)
1114970.PSF113_3327(+)
1114970.PSF113_2051(+)
1114970.PSF113_2271(+)
1114970.PSF113_1806(+)
1114970.PSF113_4541(+)not used
1114970.PSF113_2645(+)
1114970.PSF113_5260(+)
1114970.PSF113_4384(+)
1114970.PSF113_2075(+)
1114970.PSF113_3703(+)
1114970.PSF113_4703(+)
1114970.PSF113_2257(+)
1114970.PSF113_1282(+)
1114970.PSF113_1757(+)
1114970.PSF113_0942(+)
1114970.PSF113_2855(+)
1114970.PSF113_1133(+)
1114970.PSF113_0667(+)
1114970.PSF113_3281(+)
1114970.PSF113_0880(+)
1114970.PSF113_4394(+)
1114970.PSF113_4396(+)
1114970.PSF113_0413(+)
1114970.PSF113_0411(+)
1114970.PSF113_2016(+)
1114970.PSF113_4861(+)
1114970.PSF113_3263(+)
1114970.PSF113_4584(+)
1114970.PSF113_3006(+)
1114970.PSF113_2359(+)
1114970.PSF113_0477(+)
1114970.PSF113_1076(+)
1114970.PSF113_1074(+)
1114970.PSF113_1078(+)
1114970.PSF113_0296(+)
1114970.PSF113_0842(+)
1114970.PSF113_2030(+)
1114970.PSF113_3747(+)
1114970.PSF113_5567(+)
1114970.PSF113_5561(+)
1114970.PSF113_2294(+)
1114970.PSF113_2747(+)
1114970.PSF113_4236(+)
1114970.PSF113_0622(+)
1114970.PSF113_2191(+)
1114970.PSF113_3025(+)
1114970.PSF113_2375(+)
1114970.PSF113_4482(+)
1114970.PSF113_4486(+)
1114970.PSF113_1053(+)
1114970.PSF113_4263(+)
1114970.PSF113_4268(+)
1114970.PSF113_3904(+)
1114970.PSF113_4594(+)
1114970.PSF113_4776(+)
1114970.PSF113_0098(+)
1114970.PSF113_4013(+)
1114970.PSF113_0024(+)
1114970.PSF113_0022(+)
1114970.PSF113_4593(+)
1114970.PSF113_3223(+)
1114970.PSF113_4463(+)
1114970.PSF113_4460(+)
1114970.PSF113_0920(+)
1114970.PSF113_2782(+)
1114970.PSF113_2788(+)
1114970.PSF113_5833(+)
1114970.PSF113_0338(+)
1114970.PSF113_1201(+)
1114970.PSF113_1209(+)
1114970.PSF113_3204(+)
1114970.PSF113_3200(+)not used
1114970.PSF113_2154(+)
1114970.PSF113_2334(+)
1114970.PSF113_2849(+)
1114970.PSF113_0769(+)
1114970.PSF113_1499(+)
1114970.PSF113_3417(+)
1114970.PSF113_2459(+)
1114970.PSF113_0212(+)
1114970.PSF113_0214(+)
1114970.PSF113_0216(+)
1114970.PSF113_0683(+)
1114970.PSF113_1035(+)
1114970.PSF113_3888(+)
1114970.PSF113_3880(+)
1114970.PSF113_3882(+)
1114970.PSF113_2134(+)
1114970.PSF113_5489(+)
1114970.PSF113_2861(+)
1114970.PSF113_2860(+)
1114970.PSF113_2869(+)
1114970.PSF113_1560(+)
1114970.PSF113_4426(+)
1114970.PSF113_3430(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 2.4 (24/10 KEGG proteins)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0.0 (0/10 KEGG proteins)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 3.25 (26/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================