Effective results for Azospirillum sp. B510 (eggnog40)

Summary

Number of putative secreted proteins: 39
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 39 proteins (1 high, 38 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
137722.AZL_004700(PF13384)(mitochondrial)
137722.AZL_011680(PF13384)(mitochondrial)
137722.AZL_028100(PF01609)(mitochondrial)
137722.AZL_027890(PF13384)(mitochondrial)
137722.AZL_011470(PF01609)(mitochondrial)
137722.AZL_014280(PF01609)(mitochondrial)
137722.AZL_010280(PF01609)(mitochondrial)
137722.AZL_011010(PF07678)ER
137722.AZL_023530(PF01609)(mitochondrial)
137722.AZL_001220(PF13384)(mitochondrial)
137722.AZL_025240(PF13384)(mitochondrial)
137722.AZL_027490(PF13384)(mitochondrial)
137722.AZL_000550(PF13384)(mitochondrial)
137722.AZL_009380(PF13518)mitochondrial; (mitochondrial)
137722.AZL_019060(PF01609)(mitochondrial)
137722.AZL_027630(PF13518)(plastid)
137722.AZL_026980(PF13518)(plastid)
137722.AZL_018980(PF13518)(plastid)
137722.AZL_007120PF13733
137722.AZL_017210(PF01609)
137722.AZL_008820(PF01609)
137722.AZL_014180(PF01609)
137722.AZL_011480(PF01609)
137722.AZL_026960(PF01609)
137722.AZL_013730(PF01609)
137722.AZL_011070(PF12513)
137722.AZL_026560(PF01609)
137722.AZL_025270(PF13518)
137722.AZL_018900(PF01609)
137722.AZL_027750(PF01609)
137722.AZL_007790(PF01609)
137722.AZL_023950(PF01609)
137722.AZL_023550(PF01609)
137722.AZL_022140(PF01609)
137722.AZL_027860(PF13518)
137722.AZL_019040(PF01609)
137722.AZL_027290(PF01609)
137722.AZL_004020(PF09731)
137722.AZL_021260(PF01609)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================