Effective results for Sulfurihydrogenibium azorense Az-Fu1 (eggnog40)

Summary

Number of putative secreted proteins: 25
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 10 eukaryotic-like domains, contained in 25 proteins (14 high, 11 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
204536.SULAZ_1163PF13565(mitochondrial)
204536.SULAZ_1122PF13565(mitochondrial)
204536.SULAZ_0918(PF13429)ER
204536.SULAZ_1671(PF03190)ER
204536.SULAZ_1681(PF03190)ER
204536.SULAZ_1547(PF13429)ER
204536.SULAZ_0974PF13565(mitochondrial)
204536.SULAZ_1256(PF04423)(mitochondrial)
204536.SULAZ_1368PF00961
204536.SULAZ_0350PF13565
204536.SULAZ_1007PF13565
204536.SULAZ_0527(PF16114)
204536.SULAZ_1733(PF08271)
204536.SULAZ_1706PF13565
204536.SULAZ_1416PF13565
204536.SULAZ_0073PF13565
204536.SULAZ_0447(PF02943)
204536.SULAZ_0291(PF03190)
204536.SULAZ_0903PF13565
204536.SULAZ_0937PF13565
204536.SULAZ_1456PF13565
204536.SULAZ_1526PF13565
204536.SULAZ_0953(PF14792)
204536.SULAZ_0632(PF09811)
204536.SULAZ_1042PF13565

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================