Effective results for Streptomyces avermitilis MA-4680 = NBRC 14893 (eggnog40)

Summary

Number of putative secreted proteins: 350
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 74 eukaryotic-like domains, contained in 350 proteins (17 high, 333 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
227882.SAV_2895(PF02801) (PF14765) (PF00550) (PF16197) (PF00975) (PF00698) (PF08659) (PF00109)
227882.SAV_943(PF02801) (PF00698) (PF00550) (PF16197) (PF00975) (PF14765) (PF08659) (PF00109)
227882.SAV_2899(PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109)
227882.SAV_2892(PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109)
227882.SAV_2893(PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109)
227882.SAV_2897(PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109)
227882.SAV_942(PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109)
227882.SAV_7361(PF02801) (PF00698) (PF00109) (PF14765) (PF16197)ER
227882.SAV_7362(PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109)(ER)
227882.SAV_417(PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109)
227882.SAV_415(PF02801) (PF00698) (PF00550) (PF16197) (PF00975) (PF08659) (PF00109)
227882.SAV_419(PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109)
227882.SAV_418(PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109)
227882.SAV_938(PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109)
227882.SAV_939(PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109)
227882.SAV_2368(PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109)
227882.SAV_1551(PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109)
227882.SAV_2898(PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109)
227882.SAV_2896(PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109)
227882.SAV_416(PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109)
227882.SAV_7184(PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109)
227882.SAV_845(PF02801) (PF00698) (PF00550) (PF00109) (PF16197)
227882.SAV_2014(PF12972) (PF12971) (PF05089)ER
227882.SAV_1037(PF02868) (PF01447) (PF07504)mitochondrial; (mitochondrial)
227882.SAV_5669(PF02868) (PF07504) (PF01447)(ER); plastid
227882.SAV_1128(PF02868) (PF01447) (PF07504)(ER)
227882.SAV_2281(PF02801) (PF14765) (PF00698) (PF00109) (PF16197)
227882.SAV_2795(PF02868) (PF01447) (PF07504)mitochondrial
227882.SAV_2794(PF02868) (PF01447) (PF07504)(mitochondrial)
227882.SAV_2108(PF14686) (PF09284) (PF14683)(ER)
227882.SAV_5630(PF02868) (PF01447) (PF07504)ER
227882.SAV_6770(PF08022) (PF01794)(mitochondrial)
227882.SAV_1249(PF02801) (PF00109) (PF16197)(mitochondrial)
227882.SAV_5787(PF08545) (PF08541)(mitochondrial)
227882.SAV_293(PF08022) (PF01794)ER
227882.SAV_2944(PF02801) (PF00109)(ER)
227882.SAV_3388PF01839 (PF01510)(mitochondrial)
227882.SAV_2838(PF02801) (PF00109)(ER)
227882.SAV_1675(PF01433)ER
227882.SAV_6248(PF13515)mitochondrial
227882.SAV_555(PF01670)ER
227882.SAV_967(PF16483)(ER)
227882.SAV_1366(PF02868) (PF07504) (PF01447)
227882.SAV_5725(PF14087)ER
227882.SAV_1117(PF01433)ER
227882.SAV_1288(PF07335)(mitochondrial)
227882.SAV_924(PF07228)(mitochondrial)
227882.SAV_1475(PF16499)(mitochondrial)
227882.SAV_5744(PF01833)mitochondrial; (mitochondrial)
227882.SAV_1053(PF16483)mitochondrial
227882.SAV_7142(PF13653)mitochondrial
227882.SAV_4009(PF07228)mitochondrial; (mitochondrial)
227882.SAV_7207(PF01419)ER
227882.SAV_3789PF01839ER
227882.SAV_2457(PF03747)(ER)
227882.SAV_4474PF01839ER
227882.SAV_4475PF01839ER
227882.SAV_4476PF01839ER
227882.SAV_4477PF01839ER
227882.SAV_4473PF01839ER
227882.SAV_4478PF01839ER
227882.SAV_4479PF01839ER
227882.SAV_1567(PF12222)ER
227882.SAV_609(PF08545) (PF08541)(ER)
227882.SAV_2471(PF01433)(ER)
227882.SAV_2112(PF03747)(mitochondrial); (plastid)
227882.SAV_3008(PF01510)(mitochondrial)
227882.SAV_628(PF16499)ER
227882.SAV_100(PF02801) (PF00109) (PF16197)
227882.SAV_7579(PF13515)mitochondrial
227882.SAV_786(PF07228)mitochondrial
227882.SAV_1077(PF16499)(mitochondrial); plastid
227882.SAV_5988(PF12972) (PF12971) (PF05089)
227882.SAV_4160(PF12006)mitochondrial
227882.SAV_2571(PF01670)mitochondrial; (mitochondrial)
227882.SAV_5217(PF01341)ER
227882.SAV_4108(PF07228)(mitochondrial)
227882.SAV_1850(PF07335)ER
227882.SAV_1853(PF01341)ER
227882.SAV_1149PF01839ER
227882.SAV_1142(PF07228)mitochondrial
227882.SAV_2764(PF01433)mitochondrial
227882.SAV_3159(PF00550)mitochondrial
227882.SAV_2922PF01839ER
227882.SAV_6744(PF07228)mitochondrial; (mitochondrial)
227882.SAV_3197(PF00975) (PF00550)(mitochondrial)
227882.SAV_7166(PF01510)mitochondrial
227882.SAV_930(PF01510)(mitochondrial); (plastid)
227882.SAV_1353(PF16483)(mitochondrial); plastid
227882.SAV_6029(PF09924)(mitochondrial); (plastid)
227882.SAV_6514(PF03747)(ER)
227882.SAV_203(PF14087)ER
227882.SAV_6185(PF03747)ER
227882.SAV_5756(PF10435) (PF13363)(plastid)
227882.SAV_2188(PF08376)ER
227882.SAV_2186(PF16499)mitochondrial
227882.SAV_223(PF03457)(mitochondrial)
227882.SAV_6896(PF01341)(ER); (plastid)
227882.SAV_7276(PF03644)(ER)
227882.SAV_3952(PF01433)ER
227882.SAV_368(PF04434)(mitochondrial)
227882.SAV_360(PF12138)ER
227882.SAV_5287PF01839ER
227882.SAV_1498(PF13515)(ER)
227882.SAV_6958(PF08376)ER
227882.SAV_4153(PF01510)mitochondrial
227882.SAV_4151(PF07228)ER
227882.SAV_7174(PF09346)mitochondrial; (mitochondrial)
227882.SAV_7179(PF01510)(mitochondrial)
227882.SAV_3878(PF03259)(ER)
227882.SAV_7489(PF00781)(mitochondrial)
227882.SAV_5411(PF11838) (PF01433)
227882.SAV_5036(PF01510)(ER)
227882.SAV_840(PF00975)(mitochondrial)
227882.SAV_734(PF14684)(mitochondrial)
227882.SAV_557(PF01341)(mitochondrial)
227882.SAV_7321(PF04183) (PF06276)
227882.SAV_7322(PF04183) (PF06276)
227882.SAV_2276(PF08545) (PF08541)
227882.SAV_5269(PF04183) (PF06276)
227882.SAV_255(PF01433)plastid
227882.SAV_2004(PF04183) (PF06276)
227882.SAV_2292(PF02801) (PF00109)
227882.SAV_2290(PF08545) (PF08541)
227882.SAV_2194(PF08022) (PF01794)
227882.SAV_2375(PF02801) (PF00109)
227882.SAV_2374(PF08545) (PF08541)
227882.SAV_2376(PF02801) (PF00109)
227882.SAV_3769(PF11838) (PF01433)
227882.SAV_3015(PF00781)(mitochondrial)
227882.SAV_5785(PF02801) (PF00109)
227882.SAV_3201(PF00975)(mitochondrial)
227882.SAV_5600(PF02868) (PF01447)
227882.SAV_2280(PF00550) (PF08659)
227882.SAV_3660(PF02801) (PF00109)
227882.SAV_3664(PF02801) (PF00109)
227882.SAV_3665(PF02801) (PF00109)
227882.SAV_1252(PF08376)(ER)
227882.SAV_5395(PF11838) (PF01433)
227882.SAV_1093(PF07228)(mitochondrial)
227882.SAV_1098(PF07228)(plastid)
227882.SAV_5406(PF01833)plastid
227882.SAV_2961(PF03259)(plastid)
227882.SAV_1859(PF03747)(mitochondrial)
227882.SAV_3521(PF08545) (PF08541)
227882.SAV_1831(PF08545) (PF08541)
227882.SAV_1374(PF08545) (PF08541)
227882.SAV_4953(PF01000) (PF01193)
227882.SAV_6212(PF11838) (PF01433)
227882.SAV_2003(PF04183) (PF06276)
227882.SAV_440(PF01000) (PF01193)
227882.SAV_2182(PF03029)(ER)
227882.SAV_3797(PF12006)(plastid)
227882.SAV_3639(PF00975)(mitochondrial)
227882.SAV_35(PF09346)plastid
227882.SAV_2466(PF04183) (PF06276)
227882.SAV_827(PF08545) (PF08541)
227882.SAV_865(PF00975) (PF00550)
227882.SAV_3659(PF00109)(mitochondrial)
227882.SAV_2839(PF02801) (PF00109)
227882.SAV_848(PF00550)
227882.SAV_846(PF00550)
227882.SAV_847(PF00550)
227882.SAV_1086(PF07228)
227882.SAV_1084(PF09348)
227882.SAV_1885(PF03364)
227882.SAV_7131(PF08392)
227882.SAV_2568(PF01670)
227882.SAV_756(PF06241)
227882.SAV_843(PF00975)
227882.SAV_2959(PF03029)
227882.SAV_3642(PF00550)
227882.SAV_5203(PF13391)
227882.SAV_5015(PF00781)
227882.SAV_3557(PF09346)
227882.SAV_4673(PF09924)
227882.SAV_7324(PF07228)
227882.SAV_1581(PF03259)
227882.SAV_3185(PF07228)
227882.SAV_590(PF14437)
227882.SAV_2274(PF00781)
227882.SAV_2277(PF00975)
227882.SAV_4330(PF00643)
227882.SAV_407(PF00975)
227882.SAV_6772(PF01794)
227882.SAV_7288(PF07228)
227882.SAV_1391(PF07228)
227882.SAV_1137(PF00264)
227882.SAV_7360(PF00550)
227882.SAV_922(PF07228)
227882.SAV_6016(PF01510)
227882.SAV_3723(PF13391)
227882.SAV_1015(PF12138)
227882.SAV_279PF02945
227882.SAV_7252(PF06276)
227882.SAV_3928(PF07228)
227882.SAV_5565(PF07228)
227882.SAV_3746(PF13391)
227882.SAV_2294(PF02403)
227882.SAV_2291(PF00550)
227882.SAV_1714(PF03803)
227882.SAV_2998(PF03936)
227882.SAV_2191(PF03029)
227882.SAV_217(PF00550)
227882.SAV_2373(PF00550)
227882.SAV_6694(PF00781)
227882.SAV_1054(PF07228)
227882.SAV_6889(PF08376)
227882.SAV_7228(PF13515)
227882.SAV_3762(PF09346)
227882.SAV_3223(PF07228)
227882.SAV_3593(PF14437)
227882.SAV_457(PF04434)
227882.SAV_238(PF07228)
227882.SAV_3788(PF03747)
227882.SAV_5786(PF00550)
227882.SAV_5788(PF00698)
227882.SAV_3202(PF00975)
227882.SAV_437(PF07228)
227882.SAV_2841(PF03364)
227882.SAV_2840(PF00550)
227882.SAV_28(PF03457)
227882.SAV_7533(PF07931)
227882.SAV_6680PF02945
227882.SAV_3880(PF03029)
227882.SAV_410(PF07721)
227882.SAV_3620(PF14684)
227882.SAV_2697(PF03029)
227882.SAV_2694(PF08376)
227882.SAV_2695(PF03259)
227882.SAV_604(PF00550)
227882.SAV_603(PF00550)
227882.SAV_350(PF07228)
227882.SAV_608(PF00550)
227882.SAV_4459(PF01186)
227882.SAV_1977(PF04434)
227882.SAV_4180(PF14437)
227882.SAV_6962(PF03029)
227882.SAV_3083(PF12138)
227882.SAV_839(PF00550)
227882.SAV_2286(PF03364)
227882.SAV_3458(PF04434)
227882.SAV_2351(PF03364)
227882.SAV_7165(PF00550)
227882.SAV_101(PF00698)
227882.SAV_3663(PF00109)
227882.SAV_3666(PF00550)
227882.SAV_7571(PF03457)
227882.SAV_2701(PF03029)
227882.SAV_1255(PF03029)
227882.SAV_1253(PF03259)
227882.SAV_787(PF07931)
227882.SAV_871(PF00550)
227882.SAV_877(PF07931)
227882.SAV_3649(PF00550)
227882.SAV_2513(PF07228)
227882.SAV_1097(PF07228)
227882.SAV_2754(PF01510)
227882.SAV_5983(PF07228)
227882.SAV_1334(PF07228)
227882.SAV_852(PF00550)
227882.SAV_856(PF00975)
227882.SAV_855(PF00550)
227882.SAV_1152(PF00781)
227882.SAV_1879(PF00781)
227882.SAV_2962(PF08376)
227882.SAV_3PF02945
227882.SAV_6(PF03457)
227882.SAV_3156(PF00550)
227882.SAV_956(PF07228)
227882.SAV_953(PF00975)
227882.SAV_112(PF07228)
227882.SAV_7478(PF07228)
227882.SAV_3158(PF00975)
227882.SAV_2923PF01839
227882.SAV_568(PF07228)
227882.SAV_7330(PF07228)
227882.SAV_2903(PF00975)
227882.SAV_4415(PF07228)
227882.SAV_1919(PF03747)
227882.SAV_6818(PF03364)
227882.SAV_767(PF07228)
227882.SAV_7296(PF09924)
227882.SAV_587(PF07228)
227882.SAV_586(PF07228)
227882.SAV_3198(PF00550)
227882.SAV_3199(PF00550)
227882.SAV_7356(PF00264)
227882.SAV_3292(PF07250)
227882.SAV_4893(PF09346)
227882.SAV_7012(PF07721)
227882.SAV_5712(PF07721)
227882.SAV_4394(PF07228)
227882.SAV_5362(PF00264)
227882.SAV_6703(PF03259)
227882.SAV_6705(PF03029)
227882.SAV_2282(PF00550)
227882.SAV_5083(PF03747)
227882.SAV_91(PF13391)
227882.SAV_698(PF07228)
227882.SAV_6187(PF03747)
227882.SAV_6184(PF03747)
227882.SAV_6183(PF03747)
227882.SAV_5574(PF14684)
227882.SAV_3752PF01839
227882.SAV_4244(PF02403)
227882.SAV_2189(PF03259)
227882.SAV_2180(PF03259)
227882.SAV_1516(PF13515)
227882.SAV_71(PF03364)
227882.SAV_6890(PF03259)
227882.SAV_7078(PF14216)
227882.SAV_2796(PF09348)
227882.SAV_428(PF03364)
227882.SAV_2300(PF09924)
227882.SAV_58(PF01833)
227882.SAV_57(PF01833)
227882.SAV_50(PF13515)
227882.SAV_1235(PF07228)
227882.SAV_1238(PF01510)
227882.SAV_1582(PF08376)
227882.SAV_1550(PF00550)
227882.SAV_1554(PF07228)
227882.SAV_4229(PF07228)
227882.SAV_3500(PF03259)
227882.SAV_2698(PF08376)
227882.SAV_2699(PF03259)
227882.SAV_7498(PF07228)
227882.SAV_5613(PF00102)
227882.SAV_13(PF03457)
227882.SAV_1577(PF03259)
227882.SAV_1579(PF03029)
227882.SAV_7504(PF07228)
227882.SAV_1902(PF07228)
227882.SAV_6959(PF03259)
227882.SAV_1630(PF03029)
227882.SAV_1632(PF03259)
227882.SAV_5429(PF07228)
227882.SAV_3643(PF00550)
227882.SAV_808(PF07228)
227882.SAV_321(PF07228)
227882.SAV_4152(PF01433)
227882.SAV_4408(PF13515)
227882.SAV_7172(PF07228)
227882.SAV_864(PF00550)
227882.SAV_869(PF00550)
227882.SAV_3657(PF00109)
227882.SAV_3656(PF00550)
227882.SAV_6632(PF01433)
227882.SAV_6633(PF00550)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================