Effective results for Maribacter sp. HTCC2170 (eggnog40)

Summary

Number of putative secreted proteins: 98
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 33 eukaryotic-like domains, contained in 98 proteins (10 high, 88 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
313603.FB2170_01402(PF09112) (PF09113)ER
313603.FB2170_10449(PF16353) (PF02929)ER
313603.FB2170_03365(PF16757) (PF01120)ER
313603.FB2170_04030(PF16353) (PF02929)ER
313603.FB2170_02145(PF16757) (PF01120)ER
313603.FB2170_11386(PF16353) (PF02929)ER
313603.FB2170_06620(PF07971) (PF14683)ER
313603.FB2170_15013(PF16353) (PF02929)ER
313603.FB2170_14088PF15902ER
313603.FB2170_01407(PF01120)ER
313603.FB2170_01397(PF07971)ER
313603.FB2170_11916(PF06452)ER
313603.FB2170_11356(PF14329)ER
313603.FB2170_08139(PF07593)ER
313603.FB2170_01412(PF07971)ER
313603.FB2170_01417(PF06452)ER
313603.FB2170_06370(PF05684)ER
313603.FB2170_05360PF15902ER
313603.FB2170_15208(PF15071)ER
313603.FB2170_09441(PF06439)ER
313603.FB2170_08659PF00014ER
313603.FB2170_01462(PF13290)ER
313603.FB2170_09296(PF06439)ER
313603.FB2170_05965(PF10988)ER
313603.FB2170_15273(PF13415)(mitochondrial)
313603.FB2170_09456(PF16347)ER
313603.FB2170_07869(PF10988)ER
313603.FB2170_00670(PF06439)ER
313603.FB2170_07055(PF06452)(mitochondrial)
313603.FB2170_04995(PF01120)ER
313603.FB2170_15323(PF10988)ER
313603.FB2170_06910(PF14329)ER
313603.FB2170_08664PF15902ER
313603.FB2170_05115(PF16347)ER
313603.FB2170_10666(PF16401)ER; (ER)
313603.FB2170_17116(PF10988)ER
313603.FB2170_13101(PF06439)ER
313603.FB2170_08339(PF04784)ER
313603.FB2170_01931(PF16347)ER
313603.FB2170_04510(PF14588)ER
313603.FB2170_10111(PF13290) (PF11721) (PF08757)
313603.FB2170_00215(PF14588)(mitochondrial)
313603.FB2170_11601(PF06439)ER
313603.FB2170_10641(PF16347)ER
313603.FB2170_13908PF15902ER
313603.FB2170_10106(PF11721)ER
313603.FB2170_09821(PF16347)ER
313603.FB2170_08039(PF06439)ER
313603.FB2170_05125PF15902ER
313603.FB2170_08149(PF07593)ER
313603.FB2170_02205(PF08757)mitochondrial; (mitochondrial)
313603.FB2170_06090(PF06439)ER
313603.FB2170_11661(PF13653)ER
313603.FB2170_01941(PF16347)ER
313603.FB2170_03920(PF13415)ER
313603.FB2170_08379(PF04784)ER
313603.FB2170_08019PF15902ER
313603.FB2170_00315(PF06439)ER
313603.FB2170_02885(PF14938)ER
313603.FB2170_01372(PF07593)ER
313603.FB2170_03865(PF07971)ER
313603.FB2170_12266(PF08757)ER
313603.FB2170_11461(PF06452)ER
313603.FB2170_09436PF01731ER
313603.FB2170_17086(PF10988)ER
313603.FB2170_06625(PF07971)ER
313603.FB2170_04585(PF05935)ER
313603.FB2170_00770(PF06439)ER
313603.FB2170_04730(PF07593)ER
313603.FB2170_10971(PF10988)ER
313603.FB2170_12586(PF11721)ER
313603.FB2170_01432(PF07971)ER
313603.FB2170_09396(PF06439)ER
313603.FB2170_07170(PF06439)ER
313603.FB2170_11346(PF14329)(ER)
313603.FB2170_08134(PF07593)(mitochondrial)
313603.FB2170_01467(PF13287)(ER)
313603.FB2170_02105(PF01120)(plastid)
313603.FB2170_02140(PF13287) (PF01120)
313603.FB2170_02560(PF05935)(mitochondrial)
313603.FB2170_02090(PF13290) (PF01120)
313603.FB2170_08004(PF14588)(ER)
313603.FB2170_04545(PF16011)
313603.FB2170_04380PF15902
313603.FB2170_14113(PF07766)
313603.FB2170_03170(PF06452)
313603.FB2170_03165(PF06452)
313603.FB2170_14393(PF10988)
313603.FB2170_16091(PF05684)
313603.FB2170_15388(PF14588)
313603.FB2170_06080(PF16401)
313603.FB2170_11656PF15902
313603.FB2170_08744(PF08757)
313603.FB2170_03050(PF10988)
313603.FB2170_12071(PF06439)
313603.FB2170_04050(PF06439)
313603.FB2170_05235(PF16347)
313603.FB2170_16021(PF05153)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================