Effective results for Cyanothece sp. CCY0110 (eggnog40)
Summary
Number of putative secreted proteins: 605
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 193 eukaryotic-like domains, contained in 605 proteins (59 high, 546 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| 391612.CY0110_13546 | (PF00805) | mitochondrial | |||
| 391612.CY0110_23441 | PF07927 | (mitochondrial) | |||
| 391612.CY0110_25878 | (PF00805) | ER | |||
| 391612.CY0110_13953 | (PF00924) | ER | |||
| 391612.CY0110_07279 | (PF13599) | ER | |||
| 391612.CY0110_28164 | (PF00515) | ER | |||
| 391612.CY0110_30046 | (PF04087) | mitochondrial | |||
| 391612.CY0110_00645 | PF05757 | ER | |||
| 391612.CY0110_04368 | (PF13358) | mitochondrial | |||
| 391612.CY0110_22047 | (PF01737) | ER | |||
| 391612.CY0110_02752 | (PF04087) | ER; (ER) | |||
| 391612.CY0110_05667 | (PF13599) | ER | |||
| 391612.CY0110_06319 | (PF00400) | ER | |||
| 391612.CY0110_12187 | (PF11016) | ER | |||
| 391612.CY0110_20118 | (PF07466) | ER | |||
| 391612.CY0110_28089 | PF10579 | ER | |||
| 391612.CY0110_28334 | (PF00515) | ER | |||
| 391612.CY0110_00665 | (PF06514) | ER | |||
| 391612.CY0110_14140 | (PF13582) | (mitochondrial) | |||
| 391612.CY0110_28069 | (PF02163) | ER | |||
| 391612.CY0110_04588 | (PF03781) | ER | |||
| 391612.CY0110_27555 | (PF00124) | ER | |||
| 391612.CY0110_06374 | (PF13359) | mitochondrial | |||
| 391612.CY0110_24926 | PF04278 | ER | |||
| 391612.CY0110_28914 | (PF11909) | mitochondrial | |||
| 391612.CY0110_13993 | (PF05685) | (ER) | |||
| 391612.CY0110_12822 | (PF01007) | mitochondrial | |||
| 391612.CY0110_27770 | (PF11805) | ER | |||
| 391612.CY0110_04156 | (PF13359) | mitochondrial | |||
| 391612.CY0110_15405 | (PF01789) | ER | |||
| 391612.CY0110_03744 | (PF10517) | ER | |||
| 391612.CY0110_13311 | (PF05023) | ER | |||
| 391612.CY0110_23906 | (PF12159) | ER | |||
| 391612.CY0110_29149 | (PF07466) | mitochondrial; (mitochondrial) | |||
| 391612.CY0110_04176 | (PF05685) | (ER) | |||
| 391612.CY0110_29314 | (PF02163) | ER | |||
| 391612.CY0110_22522 | (PF01241) | (mitochondrial); (plastid) | |||
| 391612.CY0110_11627 | (PF02163) | ER | |||
| 391612.CY0110_01929 | PF10639 | ER | |||
| 391612.CY0110_05462 | (PF02507) | ER | |||
| 391612.CY0110_20208 | (PF00924) | (mitochondrial) | |||
| 391612.CY0110_01550 | (PF13359) | mitochondrial | |||
| 391612.CY0110_24921 | PF04278 | ER | |||
| 391612.CY0110_14033 | (PF01716) | ER | |||
| 391612.CY0110_25036 | (PF07444) | ER; (ER) | |||
| 391612.CY0110_14550 | (PF08479) | ER | |||
| 391612.CY0110_28624 | (PF02325) | ER | |||
| 391612.CY0110_02552 | (PF05729) | ER | |||
| 391612.CY0110_10282 | (PF05729) | ER | |||
| 391612.CY0110_10827 | (PF00924) | (ER); ER | |||
| 391612.CY0110_17622 | (PF00515) | (ER) | |||
| 391612.CY0110_06744 | (PF00060) | ER | |||
| 391612.CY0110_03919 | (PF03098) | (ER) | |||
| 391612.CY0110_21702 | (PF02366) | ER | |||
| 391612.CY0110_04883 | (PF13326) | ER | |||
| 391612.CY0110_12037 | (PF05685) | ER | |||
| 391612.CY0110_30016 | (PF00515) | ER | |||
| 391612.CY0110_25451 | (PF02325) | (ER) | |||
| 391612.CY0110_13681 | (PF00515) | (mitochondrial) | |||
| 391612.CY0110_08381 | PF07927 | mitochondrial | |||
| 391612.CY0110_26408 | (PF00924) | ER | |||
| 391612.CY0110_30693 | (PF01094) | (ER) | |||
| 391612.CY0110_10697 | (PF02163) | (ER); ER | |||
| 391612.CY0110_12997 | (PF03400) | (mitochondrial) | |||
| 391612.CY0110_08996 | (PF13449) | ER | |||
| 391612.CY0110_12247 | (PF00515) | ER | |||
| 391612.CY0110_29074 | (PF05685) | (mitochondrial); mitochondrial | |||
| 391612.CY0110_23991 | (PF03055) | (mitochondrial) | |||
| 391612.CY0110_20313 | (PF11460) | ER | |||
| 391612.CY0110_11072 | (PF00924) | ER | |||
| 391612.CY0110_22767 | (PF08479) | ER | |||
| 391612.CY0110_09797 | (PF00805) | mitochondrial | |||
| 391612.CY0110_11717 | (PF00924) | ER | |||
| 391612.CY0110_04101 | (PF12740) | ER | |||
| 391612.CY0110_24606 | (PF01844) (PF00078) | (mitochondrial) | |||
| 391612.CY0110_24356 | (PF00805) | ER | |||
| 391612.CY0110_06629 | (PF00060) | (mitochondrial); mitochondrial | |||
| 391612.CY0110_26717 | PF07927 | (mitochondrial) | |||
| 391612.CY0110_13186 | (PF07444) | ER | |||
| 391612.CY0110_09231 | (PF15071) | ER | |||
| 391612.CY0110_13456 | (PF03050) | (ER) | |||
| 391612.CY0110_10097 | PF07927 | (mitochondrial) | |||
| 391612.CY0110_00250 | (PF12740) | mitochondrial | |||
| 391612.CY0110_07534 | (PF00805) | ER | |||
| 391612.CY0110_09251 | (PF01761) | mitochondrial; (mitochondrial) | |||
| 391612.CY0110_06229 | (PF02163) | ER | |||
| 391612.CY0110_27580 | (PF00924) | ER | |||
| 391612.CY0110_32455 | (PF01844) | mitochondrial | |||
| 391612.CY0110_20580 | (PF00805) | ER | |||
| 391612.CY0110_28779 | (PF02806) | mitochondrial | |||
| 391612.CY0110_27485 | (PF02366) | ER | |||
| 391612.CY0110_17717 | (PF12046) | ER | |||
| 391612.CY0110_26677 | (PF01541) | mitochondrial | |||
| 391612.CY0110_28849 | (PF13301) | ER | |||
| 391612.CY0110_27223 | (PF10517) | ER | |||
| 391612.CY0110_21125 | (PF03647) | ER | |||
| 391612.CY0110_23276 | (PF12740) | ER | |||
| 391612.CY0110_32310 | (PF00515) | (mitochondrial) | |||
| 391612.CY0110_01744 | (PF00924) | mitochondrial | |||
| 391612.CY0110_26383 | (PF09295) | (ER); (mitochondrial) | |||
| 391612.CY0110_07604 | (PF00805) | ER | |||
| 391612.CY0110_25146 | (PF00924) | mitochondrial | |||
| 391612.CY0110_10562 | (PF05685) | (mitochondrial) | |||
| 391612.CY0110_15527 | (PF13301) | ER | |||
| 391612.CY0110_30061 | (PF04839) | ER; (ER) | |||
| 391612.CY0110_01899 | (PF01909) | (mitochondrial) | |||
| 391612.CY0110_04977 | (PF03432) | (mitochondrial) | |||
| 391612.CY0110_04363 | PF00292 | (mitochondrial) | |||
| 391612.CY0110_10062 | PF07082 | (mitochondrial) | |||
| 391612.CY0110_30231 | (PF00226) (PF00805) | ||||
| 391612.CY0110_03404 | (PF00805) (PF13599) | ||||
| 391612.CY0110_12752 | (PF02931) PF02932 | ||||
| 391612.CY0110_11252 | (PF01844) (PF00078) | ||||
| 391612.CY0110_22007 | (PF08477) (PF16095) | ||||
| 391612.CY0110_01010 | (PF13155) (PF03432) | ||||
| 391612.CY0110_23751 | (PF00805) (PF13599) | ||||
| 391612.CY0110_29499 | (PF01679) | ER; not used | |||
| 391612.CY0110_11392 | (PF01679) | ER; not used | |||
| 391612.CY0110_22612 | (PF03055) | (plastid) | |||
| 391612.CY0110_09787 | (PF13911) | (mitochondrial) | |||
| 391612.CY0110_14185 | (PF00772) PF03796 | ||||
| 391612.CY0110_25546 | (PF00283) | (ER); not used | |||
| 391612.CY0110_03724 | (PF05419) (PF05729) | ||||
| 391612.CY0110_10417 | (PF00400) (PF08662) | ||||
| 391612.CY0110_08351 | (PF08446) (PF00360) | ||||
| 391612.CY0110_15320 | (PF00772) PF03796 | ||||
| 391612.CY0110_09405 | (PF05419) (PF05729) | ||||
| 391612.CY0110_12127 | (PF00772) PF03796 | ||||
| 391612.CY0110_23046 | (PF01844) (PF00078) | ||||
| 391612.CY0110_05552 | (PF01844) (PF00078) | ||||
| 391612.CY0110_31275 | (PF03432) | (mitochondrial) | |||
| 391612.CY0110_12682 | PF07927 | (mitochondrial) | |||
| 391612.CY0110_05467 | (PF01701) | ER; not used | |||
| 391612.CY0110_27278 | (PF01969) | (ER) | |||
| 391612.CY0110_27273 | (PF01969) | (ER) | |||
| 391612.CY0110_02319 | PF07082 | (ER) | |||
| 391612.CY0110_26488 | (PF00400) | (ER) | |||
| 391612.CY0110_32250 | (PF13872) (PF13871) | ||||
| 391612.CY0110_23181 | (PF08477) (PF16095) | ||||
| 391612.CY0110_08236 | PF07927 | (mitochondrial) | |||
| 391612.CY0110_00635 | (PF01844) (PF00078) | ||||
| 391612.CY0110_04573 | (PF00805) (PF13599) | ||||
| 391612.CY0110_11177 | (PF00924) | (ER) | |||
| 391612.CY0110_28114 | (PF00772) PF03796 | ||||
| 391612.CY0110_08716 | (PF01844) (PF00078) | ||||
| 391612.CY0110_10992 | (PF00805) (PF13599) | ||||
| 391612.CY0110_12192 | (PF13301) | (ER) | |||
| 391612.CY0110_08506 | (PF01844) (PF00078) | ||||
| 391612.CY0110_07224 | (PF02468) | ER; not used | |||
| 391612.CY0110_27780 | (PF12049) | (ER) | |||
| 391612.CY0110_14815 | (PF13872) (PF13871) | ||||
| 391612.CY0110_31410 | (PF01541) | (mitochondrial) | |||
| 391612.CY0110_29249 | (PF01909) | (mitochondrial) | |||
| 391612.CY0110_25216 | (PF00400) (PF05729) | ||||
| 391612.CY0110_04663 | (PF01844) (PF00078) | ||||
| 391612.CY0110_28924 | (PF12600) | (plastid) | |||
| 391612.CY0110_25551 | (PF00284) (PF00283) | ||||
| 391612.CY0110_23096 | (PF00772) PF03796 | ||||
| 391612.CY0110_09642 | (PF05685) | (plastid) | |||
| 391612.CY0110_30658 | (PF01241) | plastid | |||
| 391612.CY0110_23076 | (PF00400) (PF00226) | ||||
| 391612.CY0110_23136 | (PF00772) PF03796 | ||||
| 391612.CY0110_30533 | (PF01844) (PF00078) | ||||
| 391612.CY0110_13366 | (PF00101) | (mitochondrial) | |||
| 391612.CY0110_24541 | (PF11910) | (mitochondrial) | |||
| 391612.CY0110_29444 | (PF00226) | (ER) | |||
| 391612.CY0110_00685 | (PF05685) | (mitochondrial) | |||
| 391612.CY0110_01485 | (PF01007) | (mitochondrial) | |||
| 391612.CY0110_29464 | (PF16639) (PF01333) | ||||
| 391612.CY0110_03209 | (PF11152) | (mitochondrial) | |||
| 391612.CY0110_14725 | (PF03432) | (mitochondrial) | |||
| 391612.CY0110_04261 | (PF00805) (PF13599) | ||||
| 391612.CY0110_07174 | (PF00773) | (plastid) | |||
| 391612.CY0110_31740 | (PF01844) (PF00078) | ||||
| 391612.CY0110_03079 | (PF01844) (PF00078) | ||||
| 391612.CY0110_14063 | (PF01844) (PF00078) | ||||
| 391612.CY0110_32050 | (PF07683) | (ER) | |||
| 391612.CY0110_16902 | (PF14622) | (mitochondrial) | |||
| 391612.CY0110_29234 | (PF00400) | (plastid) | |||
| 391612.CY0110_15902 | (PF08446) (PF00360) | ||||
| 391612.CY0110_09727 | (PF00226) (PF13355) | ||||
| 391612.CY0110_07669 | (PF00924) | ||||
| 391612.CY0110_03634 | (PF00924) | ||||
| 391612.CY0110_24831 | (PF05685) | ||||
| 391612.CY0110_12797 | (PF10013) | not used | |||
| 391612.CY0110_02737 | (PF02943) | ||||
| 391612.CY0110_27800 | (PF12576) | ||||
| 391612.CY0110_03174 | (PF11267) | ||||
| 391612.CY0110_11887 | (PF04455) | ||||
| 391612.CY0110_05647 | (PF01909) | ||||
| 391612.CY0110_09071 | (PF01909) | ||||
| 391612.CY0110_12967 | (PF05685) | ||||
| 391612.CY0110_14355 | (PF00773) | ||||
| 391612.CY0110_23806 | (PF00805) | ||||
| 391612.CY0110_06694 | (PF13358) | ||||
| 391612.CY0110_13022 | (PF11833) | ||||
| 391612.CY0110_07876 | (PF09458) | ||||
| 391612.CY0110_13791 | (PF00805) | ||||
| 391612.CY0110_23776 | (PF00400) | ||||
| 391612.CY0110_28149 | (PF00805) | ||||
| 391612.CY0110_28144 | (PF02806) | ||||
| 391612.CY0110_25241 | (PF05685) | ||||
| 391612.CY0110_20363 | (PF05421) | ||||
| 391612.CY0110_22217 | (PF05685) | ||||
| 391612.CY0110_21090 | (PF11264) | ||||
| 391612.CY0110_05802 | PF07927 | ||||
| 391612.CY0110_00455 | (PF02341) | ||||
| 391612.CY0110_01585 | (PF01541) | ||||
| 391612.CY0110_25933 | (PF05685) | ||||
| 391612.CY0110_21540 | (PF08479) | ||||
| 391612.CY0110_01320 | (PF03781) | ||||
| 391612.CY0110_18667 | (PF03130) | ||||
| 391612.CY0110_25656 | (PF08479) | ||||
| 391612.CY0110_29934 | (PF05491) | ||||
| 391612.CY0110_24871 | (PF00805) | ||||
| 391612.CY0110_03894 | (PF13358) | ||||
| 391612.CY0110_11272 | (PF11371) | ||||
| 391612.CY0110_10277 | (PF03055) | ||||
| 391612.CY0110_12702 | (PF05685) | ||||
| 391612.CY0110_22027 | (PF13358) | ||||
| 391612.CY0110_13002 | (PF05685) | ||||
| 391612.CY0110_13913 | (PF05685) | ||||
| 391612.CY0110_23771 | (PF03050) | ||||
| 391612.CY0110_09932 | (PF04087) | ||||
| 391612.CY0110_24796 | (PF03050) | ||||
| 391612.CY0110_24791 | (PF08446) | ||||
| 391612.CY0110_27515 | (PF05685) | ||||
| 391612.CY0110_14490 | (PF07444) | ||||
| 391612.CY0110_20308 | (PF10716) | ||||
| 391612.CY0110_01300 | (PF00515) | not used | |||
| 391612.CY0110_06109 | (PF05542) | ||||
| 391612.CY0110_09031 | (PF00400) | ||||
| 391612.CY0110_06084 | (PF13359) | ||||
| 391612.CY0110_27675 | (PF00796) | not used | |||
| 391612.CY0110_27670 | (PF02605) | ||||
| 391612.CY0110_24321 | (PF03781) | ||||
| 391612.CY0110_04306 | (PF00400) | ||||
| 391612.CY0110_30141 | (PF06745) | ||||
| 391612.CY0110_10257 | (PF12263) | ||||
| 391612.CY0110_10252 | (PF04483) | ||||
| 391612.CY0110_06654 | PF04799 | ||||
| 391612.CY0110_24361 | (PF05685) | ||||
| 391612.CY0110_10802 | (PF08847) | ||||
| 391612.CY0110_13286 | (PF13449) | ||||
| 391612.CY0110_07749 | (PF05685) | ||||
| 391612.CY0110_07219 | (PF01761) | ||||
| 391612.CY0110_04433 | (PF06485) | ||||
| 391612.CY0110_20328 | PF05225 | not used | |||
| 391612.CY0110_25756 | (PF05685) | ||||
| 391612.CY0110_04468 | PF07927 | ||||
| 391612.CY0110_05512 | PF07927 | ||||
| 391612.CY0110_26587 | (PF00226) | ||||
| 391612.CY0110_10622 | (PF16166) | ||||
| 391612.CY0110_01360 | PF00151 | ||||
| 391612.CY0110_27605 | (PF11998) | ||||
| 391612.CY0110_22617 | (PF00504) | not used | |||
| 391612.CY0110_22772 | (PF03055) | ||||
| 391612.CY0110_15135 | (PF03781) | ||||
| 391612.CY0110_15130 | (PF00078) | ||||
| 391612.CY0110_05984 | (PF13155) | ||||
| 391612.CY0110_04583 | (PF05685) | ||||
| 391612.CY0110_25566 | (PF00400) | ||||
| 391612.CY0110_21647 | (PF11623) | not used | |||
| 391612.CY0110_01170 | (PF08479) | ||||
| 391612.CY0110_26919 | (PF11965) | ||||
| 391612.CY0110_30830 | (PF03781) | ||||
| 391612.CY0110_13401 | (PF01909) | ||||
| 391612.CY0110_09201 | PF03742 | not used | |||
| 391612.CY0110_09972 | (PF00076) | ||||
| 391612.CY0110_21255 | PF00292 | ||||
| 391612.CY0110_21250 | (PF13358) | ||||
| 391612.CY0110_26702 | (PF06485) | ||||
| 391612.CY0110_22752 | PF00292 | ||||
| 391612.CY0110_22757 | (PF13358) | ||||
| 391612.CY0110_13651 | (PF11317) | ||||
| 391612.CY0110_23081 | (PF04755) | ||||
| 391612.CY0110_28064 | (PF05685) | ||||
| 391612.CY0110_15440 | (PF12263) | ||||
| 391612.CY0110_23881 | (PF13599) | ||||
| 391612.CY0110_25541 | (PF01788) | not used | |||
| 391612.CY0110_11742 | (PF14234) | ||||
| 391612.CY0110_10167 | PF08417 | ||||
| 391612.CY0110_08576 | (PF00805) | ||||
| 391612.CY0110_07709 | (PF03050) | ||||
| 391612.CY0110_12597 | (PF05685) | ||||
| 391612.CY0110_12332 | (PF00610) | ||||
| 391612.CY0110_25711 | (PF01744) | ||||
| 391612.CY0110_24006 | (PF05685) | ||||
| 391612.CY0110_10377 | (PF07683) | ||||
| 391612.CY0110_10087 | (PF05419) | ||||
| 391612.CY0110_12102 | (PF08802) | ||||
| 391612.CY0110_00950 | PF08333 | not used | |||
| 391612.CY0110_03814 | (PF12095) | ||||
| 391612.CY0110_28919 | (PF02532) | not used | |||
| 391612.CY0110_06949 | (PF00076) | ||||
| 391612.CY0110_10412 | (PF07683) | ||||
| 391612.CY0110_10147 | (PF06298) | not used | |||
| 391612.CY0110_06239 | (PF11360) | ||||
| 391612.CY0110_02807 | (PF05685) | ||||
| 391612.CY0110_27590 | PF00292 | ||||
| 391612.CY0110_24026 | (PF00076) | ||||
| 391612.CY0110_21035 | (PF11341) | ||||
| 391612.CY0110_21030 | (PF00226) | ||||
| 391612.CY0110_05572 | (PF00805) | ||||
| 391612.CY0110_20490 | (PF08975) | ||||
| 391612.CY0110_11402 | (PF03522) | ||||
| 391612.CY0110_22677 | (PF03050) | ||||
| 391612.CY0110_06004 | (PF01909) | ||||
| 391612.CY0110_08921 | (PF11282) | ||||
| 391612.CY0110_29084 | (PF00504) | ||||
| 391612.CY0110_25501 | (PF13246) | ||||
| 391612.CY0110_00245 | (PF02366) | ||||
| 391612.CY0110_22082 | (PF09353) | ||||
| 391612.CY0110_21190 | (PF06745) | ||||
| 391612.CY0110_21370 | (PF02672) | ||||
| 391612.CY0110_30850 | (PF03781) | ||||
| 391612.CY0110_09677 | (PF02136) | ||||
| 391612.CY0110_27024 | (PF05685) | ||||
| 391612.CY0110_26899 | (PF00924) | ||||
| 391612.CY0110_23901 | (PF05685) | ||||
| 391612.CY0110_29419 | (PF01541) | ||||
| 391612.CY0110_04171 | (PF05685) | ||||
| 391612.CY0110_22961 | (PF00223) | ||||
| 391612.CY0110_10847 | (PF00805) | ||||
| 391612.CY0110_13811 | (PF13358) | ||||
| 391612.CY0110_13816 | (PF05685) | ||||
| 391612.CY0110_23026 | (PF03652) | ||||
| 391612.CY0110_07084 | (PF01909) | ||||
| 391612.CY0110_24696 | (PF05685) | ||||
| 391612.CY0110_00880 | (PF03432) | ||||
| 391612.CY0110_08251 | (PF05685) | ||||
| 391612.CY0110_10107 | (PF05685) | ||||
| 391612.CY0110_10457 | (PF00805) | ||||
| 391612.CY0110_10452 | PF07927 | ||||
| 391612.CY0110_12687 | (PF05685) | ||||
| 391612.CY0110_02592 | (PF07683) | ||||
| 391612.CY0110_03979 | (PF00805) | ||||
| 391612.CY0110_21787 | (PF10063) | ||||
| 391612.CY0110_08061 | (PF13358) | ||||
| 391612.CY0110_00525 | (PF02427) | ||||
| 391612.CY0110_11992 | (PF05685) | ||||
| 391612.CY0110_08471 | (PF10999) | ||||
| 391612.CY0110_25706 | (PF00805) | ||||
| 391612.CY0110_23006 | PF03796 | not used | |||
| 391612.CY0110_04039 | (PF00515) | ||||
| 391612.CY0110_21150 | (PF05542) | ||||
| 391612.CY0110_26313 | (PF06799) | ||||
| 391612.CY0110_26647 | (PF03050) | ||||
| 391612.CY0110_29779 | (PF05685) | ||||
| 391612.CY0110_13356 | (PF03130) | ||||
| 391612.CY0110_04096 | (PF05685) | ||||
| 391612.CY0110_21450 | (PF07683) | ||||
| 391612.CY0110_09912 | (PF03781) | ||||
| 391612.CY0110_27470 | (PF01909) | ||||
| 391612.CY0110_22956 | (PF00223) | ||||
| 391612.CY0110_03239 | (PF13246) | ||||
| 391612.CY0110_03549 | (PF05969) | not used | |||
| 391612.CY0110_28449 | (PF05685) | ||||
| 391612.CY0110_04014 | (PF12452) | ||||
| 391612.CY0110_04271 | (PF00400) | ||||
| 391612.CY0110_04276 | (PF13599) | ||||
| 391612.CY0110_04903 | (PF03050) | ||||
| 391612.CY0110_04908 | (PF00400) | ||||
| 391612.CY0110_27049 | (PF03098) | ||||
| 391612.CY0110_12647 | (PF03050) | ||||
| 391612.CY0110_18497 | (PF03130) | ||||
| 391612.CY0110_03684 | (PF03050) | ||||
| 391612.CY0110_25371 | (PF03130) | ||||
| 391612.CY0110_25376 | (PF05685) | ||||
| 391612.CY0110_22642 | (PF13358) | ||||
| 391612.CY0110_27984 | (PF05685) | ||||
| 391612.CY0110_21110 | (PF03781) | ||||
| 391612.CY0110_00790 | (PF00773) | ||||
| 391612.CY0110_00975 | (PF01541) | ||||
| 391612.CY0110_26463 | (PF05685) | ||||
| 391612.CY0110_12662 | (PF01541) | ||||
| 391612.CY0110_23236 | (PF05685) | ||||
| 391612.CY0110_03664 | (PF13359) | ||||
| 391612.CY0110_08006 | (PF02325) | ||||
| 391612.CY0110_25391 | (PF02806) | ||||
| 391612.CY0110_10517 | (PF11378) | ||||
| 391612.CY0110_09752 | (PF03040) | ||||
| 391612.CY0110_13097 | (PF03050) | ||||
| 391612.CY0110_26143 | (PF05685) | ||||
| 391612.CY0110_06174 | (PF00515) | ||||
| 391612.CY0110_27430 | (PF13358) | ||||
| 391612.CY0110_30743 | (PF12204) | ||||
| 391612.CY0110_10187 | (PF02531) | ||||
| 391612.CY0110_06764 | (PF05685) | ||||
| 391612.CY0110_08806 | (PF02136) | ||||
| 391612.CY0110_23661 | (PF01761) | ||||
| 391612.CY0110_03399 | (PF01909) | ||||
| 391612.CY0110_05397 | (PF00515) | ||||
| 391612.CY0110_00125 | (PF05685) | ||||
| 391612.CY0110_27415 | (PF01909) | ||||
| 391612.CY0110_02702 | (PF00924) | ||||
| 391612.CY0110_05577 | (PF00076) | ||||
| 391612.CY0110_24146 | (PF04755) | ||||
| 391612.CY0110_15265 | (PF00805) | ||||
| 391612.CY0110_15260 | (PF05685) | ||||
| 391612.CY0110_21515 | (PF12527) | ||||
| 391612.CY0110_06709 | (PF13358) | ||||
| 391612.CY0110_07619 | (PF05685) | ||||
| 391612.CY0110_31790 | (PF05685) | ||||
| 391612.CY0110_13531 | (PF14234) | ||||
| 391612.CY0110_23271 | (PF05685) | ||||
| 391612.CY0110_28584 | (PF00124) | ||||
| 391612.CY0110_24801 | (PF00360) | ||||
| 391612.CY0110_11172 | (PF00924) | ||||
| 391612.CY0110_21727 | (PF03982) | ||||
| 391612.CY0110_09712 | (PF05685) | ||||
| 391612.CY0110_01275 | (PF01844) | ||||
| 391612.CY0110_12542 | (PF00305) | ||||
| 391612.CY0110_02239 | (PF00124) | ||||
| 391612.CY0110_04181 | (PF05685) | ||||
| 391612.CY0110_04982 | (PF13155) | not used | |||
| 391612.CY0110_06729 | (PF13358) | ||||
| 391612.CY0110_06589 | (PF05685) | ||||
| 391612.CY0110_06859 | (PF05685) | ||||
| 391612.CY0110_07679 | (PF03652) | ||||
| 391612.CY0110_19967 | (PF02941) | ||||
| 391612.CY0110_12972 | (PF05685) | ||||
| 391612.CY0110_12977 | (PF05685) | ||||
| 391612.CY0110_02914 | (PF05685) | ||||
| 391612.CY0110_31115 | (PF08479) | ||||
| 391612.CY0110_20565 | (PF00504) | not used | |||
| 391612.CY0110_00875 | (PF13155) | not used | |||
| 391612.CY0110_30196 | (PF13358) | ||||
| 391612.CY0110_23456 | PF07927 | ||||
| 391612.CY0110_20900 | (PF05685) | ||||
| 391612.CY0110_13032 | (PF00737) | ||||
| 391612.CY0110_12562 | (PF00805) | ||||
| 391612.CY0110_02219 | (PF00805) | ||||
| 391612.CY0110_31615 | (PF08479) | ||||
| 391612.CY0110_25406 | (PF01405) | not used | |||
| 391612.CY0110_24451 | (PF02392) | ||||
| 391612.CY0110_24106 | (PF09366) | ||||
| 391612.CY0110_15512 | (PF05685) | not used | |||
| 391612.CY0110_29229 | (PF00400) | ||||
| 391612.CY0110_01849 | (PF03055) | ||||
| 391612.CY0110_01844 | (PF03092) | ||||
| 391612.CY0110_14175 | (PF13358) | ||||
| 391612.CY0110_14170 | PF00292 | ||||
| 391612.CY0110_00460 | (PF00101) | ||||
| 391612.CY0110_01335 | (PF05491) | ||||
| 391612.CY0110_31865 | (PF03432) | ||||
| 391612.CY0110_07654 | (PF13358) | ||||
| 391612.CY0110_25823 | (PF00515) | ||||
| 391612.CY0110_13576 | (PF11947) | ||||
| 391612.CY0110_06309 | (PF00504) | not used | |||
| 391612.CY0110_03889 | PF00292 | ||||
| 391612.CY0110_06689 | PF00292 | ||||
| 391612.CY0110_22037 | PF08417 | ||||
| 391612.CY0110_17067 | (PF00515) | ||||
| 391612.CY0110_15752 | (PF05685) | ||||
| 391612.CY0110_11502 | (PF00805) | ||||
| 391612.CY0110_05677 | (PF05685) | ||||
| 391612.CY0110_32165 | (PF07683) | ||||
| 391612.CY0110_27665 | (PF02605) | ||||
| 391612.CY0110_14365 | (PF01541) | ||||
| 391612.CY0110_02959 | (PF05419) | ||||
| 391612.CY0110_23371 | (PF03055) | ||||
| 391612.CY0110_03439 | (PF02533) | not used | |||
| 391612.CY0110_25236 | (PF05419) | ||||
| 391612.CY0110_14605 | PF07927 | ||||
| 391612.CY0110_25908 | (PF00805) | ||||
| 391612.CY0110_24166 | (PF00400) | ||||
| 391612.CY0110_21260 | PF05225 | not used | |||
| 391612.CY0110_05697 | (PF05685) | ||||
| 391612.CY0110_32140 | (PF07683) | ||||
| 391612.CY0110_07699 | (PF00226) | ||||
| 391612.CY0110_03594 | (PF00226) | ||||
| 391612.CY0110_15120 | (PF03781) | ||||
| 391612.CY0110_05999 | PF02005 | ||||
| 391612.CY0110_29759 | (PF03050) | ||||
| 391612.CY0110_07779 | (PF03050) | ||||
| 391612.CY0110_12897 | (PF00805) | ||||
| 391612.CY0110_12097 | (PF00124) | ||||
| 391612.CY0110_20338 | (PF13358) | ||||
| 391612.CY0110_20333 | PF00292 | ||||
| 391612.CY0110_23766 | (PF00400) | ||||
| 391612.CY0110_11902 | (PF00773) | ||||
| 391612.CY0110_07906 | (PF11051) | ||||
| 391612.CY0110_08486 | PF08417 | ||||
| 391612.CY0110_22747 | PF05225 | not used | |||
| 391612.CY0110_28079 | (PF02672) | ||||
| 391612.CY0110_27954 | (PF03050) | not used | |||
| 391612.CY0110_24351 | (PF00707) | ||||
| 391612.CY0110_11227 | (PF10693) | ||||
| 391612.CY0110_02879 | (PF00805) | ||||
| 391612.CY0110_31035 | (PF00773) | ||||
| 391612.CY0110_25948 | (PF13358) | ||||
| 391612.CY0110_11962 | (PF05685) | ||||
| 391612.CY0110_28019 | (PF11965) | ||||
| 391612.CY0110_29634 | (PF02806) | ||||
| 391612.CY0110_20017 | PF07927 | ||||
| 391612.CY0110_14255 | (PF03400) | ||||
| 391612.CY0110_06604 | (PF13358) | ||||
| 391612.CY0110_10402 | (PF03050) | ||||
| 391612.CY0110_10407 | PF00292 | ||||
| 391612.CY0110_12857 | (PF01541) | ||||
| 391612.CY0110_02812 | (PF01909) | ||||
| 391612.CY0110_04413 | (PF13449) | ||||
| 391612.CY0110_04418 | (PF13449) | ||||
| 391612.CY0110_11417 | PF07927 | ||||
| 391612.CY0110_06014 | (PF00805) | ||||
| 391612.CY0110_20865 | (PF03400) | ||||
| 391612.CY0110_10892 | (PF00805) | ||||
| 391612.CY0110_13841 | (PF00924) | ||||
| 391612.CY0110_09390 | (PF10184) | ||||
| 391612.CY0110_15415 | (PF03050) | ||||
| 391612.CY0110_02489 | (PF04423) | ||||
| 391612.CY0110_08131 | (PF11210) | ||||
| 391612.CY0110_30840 | (PF00078) | ||||
| 391612.CY0110_09852 | PF07927 | ||||
| 391612.CY0110_12307 | (PF11347) | ||||
| 391612.CY0110_27585 | (PF13358) | ||||
| 391612.CY0110_00130 | (PF05685) | ||||
| 391612.CY0110_15335 | (PF05685) | ||||
| 391612.CY0110_00395 | (PF00124) | ||||
| 391612.CY0110_25988 | (PF05685) | ||||
| 391612.CY0110_06034 | (PF01909) | ||||
| 391612.CY0110_26752 | (PF05685) | ||||
| 391612.CY0110_13826 | (PF05685) | ||||
| 391612.CY0110_08936 | (PF05685) | ||||
| 391612.CY0110_27243 | (PF02529) | not used | |||
| 391612.CY0110_27934 | (PF04481) | ||||
| 391612.CY0110_00275 | (PF05685) | ||||
| 391612.CY0110_25076 | (PF14249) | ||||
| 391612.CY0110_04206 | (PF00226) | ||||
| 391612.CY0110_03184 | (PF00400) | ||||
| 391612.CY0110_03984 | (PF00805) | ||||
| 391612.CY0110_08071 | (PF05685) | ||||
| 391612.CY0110_14008 | (PF00707) | ||||
| 391612.CY0110_13806 | PF00292 | ||||
| 391612.CY0110_13801 | PF05225 | not used | |||
| 391612.CY0110_02114 | (PF01909) | ||||
| 391612.CY0110_05067 | (PF01541) | ||||
| 391612.CY0110_17442 | (PF00805) | ||||
| 391612.CY0110_07139 | (PF05419) | ||||
| 391612.CY0110_24271 | (PF00805) | ||||
| 391612.CY0110_25973 | (PF00124) | ||||
| 391612.CY0110_20790 | (PF08041) | not used | |||
| 391612.CY0110_20795 | (PF03912) | ||||
| 391612.CY0110_08466 | (PF08854) | ||||
| 391612.CY0110_04383 | (PF00805) | not used | |||
| 391612.CY0110_02797 | (PF00226) | ||||
| 391612.CY0110_28184 | (PF05685) | ||||
| 391612.CY0110_11282 | (PF00805) | ||||
| 391612.CY0110_11862 | PF08317 | ||||
| 391612.CY0110_06799 | (PF01192) | ||||
| 391612.CY0110_06794 | (PF05419) | ||||
| 391612.CY0110_21927 | (PF05685) | ||||
| 391612.CY0110_20133 | (PF08853) | ||||
| 391612.CY0110_04493 | (PF12617) | ||||
| 391612.CY0110_29469 | (PF08802) | ||||
| 391612.CY0110_26802 | (PF05419) | ||||
| 391612.CY0110_26807 | (PF00400) | ||||
| 391612.CY0110_22317 | (PF08855) | ||||
| 391612.CY0110_00030 | (PF03912) | ||||
| 391612.CY0110_01784 | (PF03050) | ||||
| 391612.CY0110_01789 | (PF05685) | ||||
| 391612.CY0110_06519 | (PF03050) | ||||
| 391612.CY0110_22572 | (PF03781) | ||||
| 391612.CY0110_03924 | (PF03098) | ||||
| 391612.CY0110_14068 | (PF05729) | ||||
| 391612.CY0110_00575 | (PF09366) | ||||
| 391612.CY0110_09156 | (PF01192) | ||||
| 391612.CY0110_25813 | PF06888 | ||||
| 391612.CY0110_23426 | (PF05685) | ||||
| 391612.CY0110_32055 | (PF07683) | ||||
| 391612.CY0110_09375 | (PF05685) | ||||
| 391612.CY0110_27425 | PF00292 | ||||
| 391612.CY0110_16032 | (PF10674) | ||||
| 391612.CY0110_28679 | (PF00805) | ||||
| 391612.CY0110_00015 | (PF00805) | not used | |||
| 391612.CY0110_06579 | (PF12204) | not used | |||
| 391612.CY0110_08811 | (PF03781) | ||||
| 391612.CY0110_08816 | (PF00076) | ||||
| 391612.CY0110_07489 | (PF00924) | ||||
| 391612.CY0110_07159 | (PF13301) | ||||
| 391612.CY0110_24561 | (PF03050) | ||||
| 391612.CY0110_03904 | (PF05685) | ||||
| 391612.CY0110_12457 | (PF05685) | ||||
| 391612.CY0110_05142 | (PF00226) | ||||
| 391612.CY0110_13888 | (PF14622) | ||||
| 391612.CY0110_32075 | (PF05685) | ||||
| 391612.CY0110_28654 | (PF05729) | ||||
| 391612.CY0110_09510 | (PF03781) | ||||
| 391612.CY0110_20655 | (PF06745) | ||||
| 391612.CY0110_10977 | (PF05419) | ||||
| 391612.CY0110_05607 | PF09668 | ||||
| 391612.CY0110_31525 | (PF00226) | not used | |||
| 391612.CY0110_23261 | (PF00400) | ||||
| 391612.CY0110_12927 | (PF02806) | ||||
| 391612.CY0110_10567 | (PF00805) | ||||
| 391612.CY0110_30201 | PF00292 | ||||
| 391612.CY0110_27288 | (PF00400) | ||||
| 391612.CY0110_24486 | (PF13246) | ||||
| 391612.CY0110_27824 | (PF05685) | ||||
| 391612.CY0110_24736 | (PF10664) | ||||
| 391612.CY0110_11317 | (PF00076) | ||||
| 391612.CY0110_20103 | PF07927 | not used | |||
| 391612.CY0110_06714 | PF00292 | ||||
| 391612.CY0110_06824 | (PF01909) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: YES (FDR = 0.5 %)
- Functional Type III secretion system: NO (FDR = 12.5 %)
- Functional Type IV secretion system: NO (FDR = 7.2 %)
- Functional Type VI secretion system: NO (FDR = 7.7 %)
Individual results for each secretion system
- List of 100 most important COGs/NOGs for prediction of functional Type III secretion system (T3_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type IV secretion system (T4_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type VI secretion system (T6_top100_COGS.xls)
- List of COGs assigned to Type III secretion system in KEGG (T3SS_KEGG_cmp.xls)
- List of COGs assigned to Type IV secretion system in KEGG (T4SS_KEGG_cmp.xls)
- List of COGs assigned to Type VI secretion system in KEGG (T6SS_KEGG_cmp.xls)
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
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Contact
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- +43 1 4277 876681
- contact.cube@univie.ac.at
