Effective results for Streptomyces sp. SirexAA-E (eggnog40)

Summary

Number of putative secreted proteins: 102
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 26 eukaryotic-like domains, contained in 102 proteins (2 high, 100 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
862751.SACTE_5248				(PF17103) (PF17101) (PF11380) (PF17102)	mitochondrial; (mitochondrial)
862751.SACTE_5250				(PF11380) (PF17102) (PF17101) (PF17103)
862751.SACTE_6428				(PF03067)	(ER)
862751.SACTE_6169				(PF02983)	ER
862751.SACTE_1136				(PF01510)	ER
862751.SACTE_3159				(PF03067)	ER
862751.SACTE_3171				(PF01510)	ER
862751.SACTE_6431				(PF01510)	ER
862751.SACTE_5592				(PF03537)	ER
862751.SACTE_2313				(PF03067)	ER
862751.SACTE_2698				(PF03995)	ER
862751.SACTE_5330				(PF02983)	mitochondrial
862751.SACTE_2506				(PF01510)	(ER)
862751.SACTE_4006				(PF03995)	ER
862751.SACTE_6526				(PF04471)	ER
862751.SACTE_1602				(PF03537)	ER
862751.SACTE_2111				(PF03995)	ER
862751.SACTE_6303				(PF02983)	mitochondrial; (ER)
862751.SACTE_2877				(PF16483)	(ER)
862751.SACTE_2872				(PF02983)	ER
862751.SACTE_1161				(PF03067)	mitochondrial; ER
862751.SACTE_1168				(PF02983)	(ER)
862751.SACTE_5662				(PF04471)	(ER); (mitochondrial)
862751.SACTE_4755				(PF16483)	mitochondrial
862751.SACTE_6493				(PF03067)	ER
862751.SACTE_5413				(PF01730)	(ER); (plastid)
862751.SACTE_6535				(PF03995)	mitochondrial
862751.SACTE_3064				(PF00182)	ER
862751.SACTE_3065				(PF00182)	ER
862751.SACTE_0081				(PF00182)	ER
862751.SACTE_0080				(PF03067)	ER
862751.SACTE_1863				(PF03995)	ER
862751.SACTE_5418				(PF01510)	mitochondrial
862751.SACTE_0470				(PF02342)	(ER)
862751.SACTE_6281				(PF12740)	(plastid)
862751.SACTE_1467				(PF00425)	(plastid)
862751.SACTE_1169				(PF02983)	(mitochondrial)
862751.SACTE_0643				(PF01774)	(plastid)
862751.SACTE_0951				(PF00425)
862751.SACTE_6074				(PF00425)
862751.SACTE_1131				(PF01510)
862751.SACTE_0244				(PF01510)
862751.SACTE_2338				(PF04471)
862751.SACTE_5593				(PF12138)
862751.SACTE_4688				(PF01510)
862751.SACTE_3038				(PF02342)
862751.SACTE_3037				(PF02342)
862751.SACTE_1193				(PF03747)
862751.SACTE_1389				(PF01774)
862751.SACTE_1380				(PF02342)
862751.SACTE_5721				PF00022
862751.SACTE_5720				(PF12826)
862751.SACTE_0038				(PF04471)
862751.SACTE_1549				(PF00425)
862751.SACTE_4028				(PF09445)
862751.SACTE_6367				(PF00348)
862751.SACTE_3700				(PF02342)
862751.SACTE_2284				(PF02342)
862751.SACTE_5729				(PF12740)
862751.SACTE_1855				(PF02342)
862751.SACTE_0076				(PF03537)
862751.SACTE_1859				(PF02342)
862751.SACTE_1858				(PF02342)
862751.SACTE_1444				(PF14027)
862751.SACTE_1058				(PF03747)
862751.SACTE_1328				(PF02342)
862751.SACTE_4968				(PF02342)
862751.SACTE_6304				(PF00425)
862751.SACTE_0325				(PF02342)
862751.SACTE_6343				(PF14027)
862751.SACTE_1758				(PF00425)
862751.SACTE_1751				(PF00425)
862751.SACTE_0732				(PF00425)
862751.SACTE_2680				(PF03747)
862751.SACTE_5791				(PF00348)
862751.SACTE_5157				(PF00348)
862751.SACTE_0003				(PF02342)
862751.SACTE_4696				(PF12826)
862751.SACTE_1373				(PF12826)
862751.SACTE_1379				(PF02342)
862751.SACTE_3285				(PF04471)
862751.SACTE_4482				(PF01510)
862751.SACTE_4484				(PF00348)
862751.SACTE_0026				(PF04471)
862751.SACTE_5833				(PF03803)
862751.SACTE_1413				(PF03747)
862751.SACTE_1391				(PF01730)
862751.SACTE_3895				(PF00348)
862751.SACTE_2764				(PF00348)
862751.SACTE_5925				(PF00348)
862751.SACTE_1453				(PF03747)
862751.SACTE_1452				(PF03747)
862751.SACTE_1455				(PF03747)
862751.SACTE_1454				(PF03747)
862751.SACTE_0645				(PF01730)
862751.SACTE_4971				(PF03747)
862751.SACTE_4407				(PF12138)
862751.SACTE_2809				(PF12826)
862751.SACTE_2788				PF08213	not used
862751.SACTE_5415				(PF01774)
862751.SACTE_4426				(PF02342)
862751.SACTE_1880				(PF00348)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================