Effective results for Mycoplasma leachii PG50 (eggnog40)

Summary

Number of putative secreted proteins: 39
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 4 eukaryotic-like domains, contained in 39 proteins (36 high, 3 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
880447.MSB_A0508PF03382ER
880447.MSB_A0590PF03382ER
880447.MSB_A0209PF03382ER
880447.MSB_A0292PF03382ER
880447.MSB_A0318PF03382ER
880447.MSB_A0044PF03382ER
880447.MSB_A0560PF03382ER
880447.MSB_A0767PF03382ER
880447.MSB_A0182PF03382ER
880447.MSB_A0183PF03382ER
880447.MSB_A0630PF03382ER
880447.MSB_A0919PF03382ER
880447.MSB_A0575PF03382ER
880447.MSB_A0574PF03382ER
880447.MSB_A0821PF03382(ER)
880447.MSB_A0536(PF11074)(mitochondrial)
880447.MSB_A0746PF03382(mitochondrial)
880447.MSB_A0809PF03382
880447.MSB_A0050PF03382
880447.MSB_A0056PF03382
880447.MSB_A0057PF03382
880447.MSB_A0023PF03382
880447.MSB_A0022PF03382not used
880447.MSB_A0208PF03382not used
880447.MSB_A0113PF03382
880447.MSB_A0729PF03382not used
880447.MSB_A0768PF03382
880447.MSB_A0045PF03382
880447.MSB_A0461PF03382
880447.MSB_A0867(PF08840)
880447.MSB_A0636PF03382
880447.MSB_A0637PF03382
880447.MSB_A0731PF00335
880447.MSB_A0730PF03382
880447.MSB_A0770(PF08840)
880447.MSB_A0256PF03382not used
880447.MSB_A0794PF03382
880447.MSB_A0747PF03382not used
880447.MSB_A0748PF03382

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================