Effective results for Plautia stali symbiont (eggnog40)

Summary

Number of putative secreted proteins: 27
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 27 proteins (0 high, 27 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
891974.Pstas_010100013644(PF00834)(ER)
891974.Pstas_010100005864(PF08125)mitochondrial
891974.Pstas_010100007528(PF08125)ER
891974.Pstas_010100005562(PF06779)ER
891974.Pstas_010100013609(PF01226)(mitochondrial)
891974.Pstas_010100019789(PF00959)(mitochondrial)
891974.Pstas_010100017830(PF06779)ER
891974.Pstas_010100005557(PF06779)(mitochondrial)
891974.Pstas_010100023749(PF08125)
891974.Pstas_010100018250(PF00959)
891974.Pstas_010100005859(PF08125)
891974.Pstas_010100016576(PF05704)
891974.Pstas_010100002482(PF00959)
891974.Pstas_010100009433(PF01226)
891974.Pstas_010100002007(PF10685)not used
891974.Pstas_010100010395(PF08125)
891974.Pstas_010100022047(PF00834)
891974.Pstas_010100015336(PF10685)
891974.Pstas_010100015326(PF16485)
891974.Pstas_010100014204(PF01226)
891974.Pstas_010100000645(PF14328)
891974.Pstas_010100007620(PF10685)not used
891974.Pstas_010100013604(PF01226)
891974.Pstas_010100014499(PF08125)
891974.Pstas_010100020254(PF01226)
891974.Pstas_010100014114(PF00959)
891974.Pstas_010100014901(PF00834)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================