Effective results for Streptococcus oralis Uo5 (eggnog40)

Summary

Number of putative secreted proteins: 99
- Predicted by T4SEpre: 100
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 21 proteins (2 high, 19 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
927666.SOR_1203+ER
927666.SOR_1313+ER
927666.SOR_0893+mitochondrial
927666.SOR_0535+(mitochondrial); (plastid)
927666.SOR_1758(PF00344)mitochondrial
927666.SOR_1113+ER
927666.SOR_0510+mitochondrial; (mitochondrial)
927666.SOR_0511+ER
927666.SOR_0358(PF03644)mitochondrial
927666.SOR_1175(PF03840)ER
927666.SOR_1928+ER
927666.SOR_1344+ER
927666.SOR_1580(PF00344)ER; (mitochondrial)
927666.SOR_1906+ER
927666.SOR_1167+ER
927666.SOR_0620+ER
927666.SOR_1395(PF03083)ER
927666.SOR_0760(PF04991)(ER)
927666.SOR_0763(PF04991)mitochondrial
927666.SOR_1964(PF05257)ER
927666.SOR_1700PF04103ER
927666.SOR_1499+ER
927666.SOR_1141+ER
927666.SOR_1572(PF03840)ER
927666.SOR_0013+ER
927666.SOR_1832+ER
927666.SOR_0954+ER
927666.SOR_0002+mitochondrial; (mitochondrial)
927666.SOR_1281+ER
927666.SOR_1661PF02916(mitochondrial)
927666.SOR_1069+(mitochondrial)
927666.SOR_1295+ER
927666.SOR_1854(PF09683)ER
927666.SOR_1676+ER
927666.SOR_1072+ER
927666.SOR_1076+ER
927666.SOR_1075+ER
927666.SOR_1641+ER
927666.SOR_1874+ER
927666.SOR_0537+ER
927666.SOR_0261+(mitochondrial)
927666.SOR_0068+(ER)
927666.SOR_1480(PF05257)(ER)
927666.SOR_0762(PF04991)(ER)
927666.SOR_1962+(PF05257)
927666.SOR_1722+(ER)
927666.SOR_1792+
927666.SOR_1797+
927666.SOR_0311+
927666.SOR_0674+
927666.SOR_1413+
927666.SOR_0782+
927666.SOR_1307+
927666.SOR_1128(PF05495)
927666.SOR_0665+
927666.SOR_1429+
927666.SOR_0248+
927666.SOR_1209+
927666.SOR_1759+
927666.SOR_1753+
927666.SOR_0330+
927666.SOR_0506+
927666.SOR_0347+
927666.SOR_0514+
927666.SOR_1597+
927666.SOR_0187+
927666.SOR_0977+
927666.SOR_0626+
927666.SOR_0194+
927666.SOR_1377(PF01633)
927666.SOR_0579+
927666.SOR_1974+
927666.SOR_0564+
927666.SOR_1969+
927666.SOR_0976+
927666.SOR_0776+
927666.SOR_1259+
927666.SOR_1954+
927666.SOR_0396+
927666.SOR_1371+
927666.SOR_0289+
927666.SOR_1809(PF03083)
927666.SOR_1942(PF05257)
927666.SOR_0877+
927666.SOR_0955+
927666.SOR_0485+
927666.SOR_1991+
927666.SOR_0851+
927666.SOR_1198+
927666.SOR_1250+
927666.SOR_1268+
927666.SOR_0585+
927666.SOR_1296+
927666.SOR_1183+
927666.SOR_0218+
927666.SOR_1622+
927666.SOR_1654(PF04991)
927666.SOR_1097(PF01633)
927666.SOR_1254+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0 (0/0 KEGG proteins)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================