Genomes encoding eukaryotic-like proteins

PF05691 Raffinose synthase or seed imbibition protein Sip1

Copy number in non-pathogens:
Mean=0.01 Stddev=0.10

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 9 1
Bifidobacterium longum s 9 1
Bifidobacterium longum subsp. infantis s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bifidobacterium longum subsp. longum JCM 1217 s 9 1
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 s 9 1
Bacteroides fragilis NCTC 9343 s 9 1
Bifidobacterium longum subsp. longum F8 s 9 1
Bacteroides fragilis 638R s 9 1
Akkermansia muciniphila s 9 1
Bifidobacterium longum subsp. infantis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides thetaiotaomicron s 9 1
Bacteroides thetaiotaomicron s 9 1
Bacteroides fragilis s 9 1
Turicibacter sanguinis s 9 1
Bacteroides thetaiotaomicron s 9 1
Bacteroides vulgatus s 9 1
Bacteroides thetaiotaomicron s 9 1
Bacteroides vulgatus s 9 1
Bacteroides thetaiotaomicron s 9 1
Bacteroides vulgatus s 9 1
Bacteroides thetaiotaomicron s 9 1
Bifidobacterium longum s 9 1
Bifidobacterium longum s 9 1
Bifidobacterium longum s 9 1
Bifidobacterium animalis s 9 1
Bifidobacterium animalis s 9 1
Bacteroides plebeius DSM 17135 s 9 1
Bacteroides dorei DSM 17855 s 9 1
Paenibacillus sp. JDR-2 s 9 1
Bifidobacterium longum subsp. longum ATCC 55813 s 9 1
Bacteroides vulgatus PC510 s 9 1
Turicibacter sanguinis PC909 s 9 1
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 s 9 1
Turicibacter sp. HGF1 s 9 1
Akkermansia muciniphila ATCC BAA-835 s 9 1
Bacteroides ovatus ATCC 8483 s 9 1
Bifidobacterium animalis subsp. lactis BS 01 s 9 1
Bifidobacterium longum subsp. longum 2-2B s 9 1
Bifidobacterium longum subsp. longum 35B s 9 1
Lachnospiraceae bacterium A4 s 9 1
Parabacteroides sp. ASF519 s 9 1
Didymococcus colitermitum TAV2 s 9 1
Opitutaceae bacterium TAV1 s 19 2
Bacteroides fragilis str. J-143-4 s 9 1
Bacteroides fragilis str. I1345 s 9 1
Bacteroides fragilis str. J38-1 s 9 1
Bacteroides fragilis str. A7 (UDC12-2) s 9 1
Bacteroides fragilis str. Ds-233 s 9 1
Bacteroides fragilis str. DS-208 s 9 1
Bacteroides fragilis str. DS-71 s 9 1
Bacteroides fragilis str. DS-166 s 9 1
Bacteroides fragilis str. 20793-3 s 9 1
Bacteroides fragilis str. 2-F-2 #4 s 9 1
Bacteroides fragilis str. 2-F-2 #7 s 9 1
Bacteroides fragilis str. 3988 T1 s 9 1
Bacteroides fragilis str. S13 L11 s 9 1
Bacteroides fragilis str. S23 R14 s 9 1
Bacteroides fragilis str. 1007-1-F #7 s 9 1
Bacteroides fragilis str. 1007-1-F #8 s 9 1
Bacteroides fragilis str. 1007-1-F #9 s 9 1
Bacteroides fragilis str. 1009-4-F #7 s 9 1
Bacteroides fragilis str. 1007-1-F #10 s 9 1
Bacteroides fragilis str. 1009-4-F #10 s 9 1
Bacteroides fragilis str. 3397 T14 s 9 1
Bacteroides fragilis str. 3397 N2 s 9 1
Bacteroides fragilis str. 3719 A10 s 9 1
Bacteroides fragilis str. 3774 T13 s 9 1
Bacteroides fragilis str. 2-F-2 #5 s 9 1
Bacteroides fragilis str. 3783N1-2 s 9 1
Bacteroides fragilis str. 3783N1-6 s 9 1
Bacteroides fragilis str. 3397 N3 s 9 1
Bacteroides fragilis str. 3719 T6 s 9 1
Bacteroides fragilis str. 3783N1-8 s 9 1
Bacteroides fragilis str. 3996 N(B) 6 s 9 1
Bacteroides fragilis str. 3783N2-1 s 9 1
Bacteroides fragilis str. 3998 T(B) 4 s 9 1
Bacteroides fragilis str. 3986 T(B)9 s 9 1
Bacteroides fragilis str. 3976T7 s 9 1
Bacteroides fragilis str. 3986T(B)10 s 9 1
Bacteroides fragilis str. 3976T8 s 9 1
Bacteroides fragilis str. 3986 T(B)13 s 9 1
Bacteroides fragilis str. 3986 N(B)22 s 9 1
Bacteroides fragilis str. 3988T(B)14 s 9 1
Bacteroides fragilis str. S6L3 s 9 1
Bacteroides fragilis str. S6L8 s 9 1
Bacteroides fragilis str. S6R5 s 9 1
Bacteroides fragilis str. S6R6 s 9 1
Bacteroides fragilis str. S24L15 s 9 1
Bacteroides fragilis str. S24L26 s 9 1
Bacteroides fragilis str. S24L34 s 9 1
Bacteroides fragilis str. S36L5 s 9 1
Bacteroides fragilis str. S36L11 s 9 1
Bacteroides fragilis str. S23L24 s 9 1
Bacteroides fragilis str. S38L3 s 9 1
Bacteroides fragilis str. S38L5 s 9 1
Bacteroides fragilis str. 3-F-2 #6 s 9 1
Bacteroides fragilis str. 34-F-2 #13 s 9 1
Bacteroides fragilis str. 1007-1-F #3 s 9 1
Bacteroides fragilis str. 1007-1-F #4 s 9 1
Bacteroides fragilis str. 3986 N(B)19 s 9 1
Bacteroides fragilis str. 3725 D9(v) s 9 1
Bacteroides fragilis str. 3998T(B)3 s 9 1
Bacteroides fragilis str. S36L12 s 9 1
Clostridium sp. KLE 1755 s 9 1
Endozoicomonas elysicola DSM 22380 s 9 1
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 9 1
Bifidobacterium longum DJO10A s 9 1
Bifidobacterium choerinum DSM 20434 s 9 1
Clostridiales bacterium NK3B98 s 9 1
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 s 9 1
Bifidobacterium thermacidophilum subsp. porcinum DSM 17755 s 9 1
Bifidobacterium choerinum DSM 20434 s 9 1
Bacteroides fragilis 3_1_12 s 9 1
Bacteroides sp. 1_1_6 s 9 1
Bacteroides sp. 3_2_5 s 9 1
Bacteroides sp. 4_3_47FAA s 9 1
Bacteroides sp. 9_1_42FAA s 9 1
Bacteroides dorei 5_1_36/D4 s 9 1
Bacteroides sp. 2_1_16 s 9 1
Bacteroides sp. 3_1_33FAA s 9 1
Bacteroides sp. 3_1_23 s 9 1
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 9 1
Bacteroides oleiciplenus YIT 12058 s 9 1
Bacteroides dorei CL02T00C15 s 9 1
Bacteroides dorei CL02T12C06 s 9 1
Bacteroides dorei CL03T12C01 s 9 1
Bacteroides fragilis CL03T00C08 s 9 1
Bacteroides fragilis CL03T12C07 s 9 1
Bacteroides fragilis CL05T12C13 s 9 1
Bacteroides fragilis CL07T00C01 s 9 1
Bacteroides fragilis CL07T12C05 s 9 1
Bacteroides ovatus CL02T12C04 s 9 1
Bacteroides salyersiae CL02T12C01 s 9 1
Bacteroides vulgatus CL09T03C04 s 9 1
Parabacteroides goldsteinii CL02T12C30 s 9 1
Bacteroides fragilis HMW 610 s 9 1
Bacteroides fragilis HMW 615 s 9 1
Bacteroides fragilis HMW 616 s 9 1
Bifidobacterium animalis subsp. lactis HN019 s 9 1
Bacteroides faecis MAJ27 s 9 1
Bifidobacterium longum subsp. longum CMCC P0001 s 9 1
Bifidobacterium longum E18 s 9 1
Bifidobacterium longum D2957 s 9 1
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 9 1
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 9 1
Bifidobacterium animalis subsp. lactis BB-12 s 9 1
Bifidobacterium animalis subsp. lactis DSM 10140 s 9 1
Bifidobacterium animalis subsp. lactis Bl-04 s 9 1
Bifidobacterium longum subsp. longum JDM301 s 9 1
Bifidobacterium animalis subsp. lactis Bi-07 s 9 1
Bifidobacterium thermophilum RBL67 s 9 1
Waddlia chondrophila WSU 86-1044 s 9 1
Bifidobacterium longum subsp. longum BBMN68 s 9 1
Bifidobacterium animalis subsp. lactis AD011 s 9 1
Bifidobacterium longum DJO10A s 9 1
Bifidobacterium longum subsp. longum KACC 91563 s 9 1
Bifidobacterium animalis subsp. animalis ATCC 25527 s 9 1
Bifidobacterium breve UCC2003 s 9 1
Bacteroides vulgatus ATCC 8482 s 9 1
Bifidobacterium animalis subsp. lactis CNCM I-2494 s 9 1
Bifidobacterium animalis subsp. animalis s 9 1
Bifidobacterium cuniculi s 9 1
Bifidobacterium gallinarum s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bifidobacterium pseudolongum subsp. globosum s 9 1
Bifidobacterium thermophilum s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bifidobacterium animalis s 9 1
Erysipelotrichaceae bacterium NK3D112 s 9 1
Lachnospiraceae bacterium MC2017 s 9 1
Bifidobacterium longum s 9 1
Endozoicomonas elysicola s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides thetaiotaomicron s 9 1
Bifidobacterium animalis subsp. lactis s 9 1
Bifidobacterium breve 2L s 9 1
Bifidobacterium breve JCM 7019 s 9 1
Bacteroides thetaiotaomicron s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bifidobacterium animalis s 9 1
Parabacteroides sp. HGS0025 s 9 1
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 9 1
Bacteroides fragilis s 9 1
Bacteroides ovatus s 9 1
Bacteroides dorei CL03T12C01 s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bifidobacterium breve s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bifidobacterium longum s 9 1
Bacteroides ovatus s 9 1
Bacteroides thetaiotaomicron s 9 1
Bifidobacterium animalis s 9 1
Akkermansia muciniphila s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Endozoicomonas atrinae s 9 1
Bacteroides fragilis s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bifidobacterium longum s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bacteroides thetaiotaomicron s 9 1
Bacteroides vulgatus s 9 1
Bifidobacterium longum s 9 1
Waddlia chondrophila WSU 86-1044 s 9 1
Bifidobacterium longum subsp. longum s 9 1
Akkermansia sp. KLE1605 s 9 1
Bifidobacterium animalis subsp. animalis s 9 1
Akkermansia muciniphila s 9 1
Bacteroides fragilis s 9 1
Bacteroides ovatus s 9 1
Bacteroides faecis MAJ27 s 9 1
Eisenbergiella tayi s 9 1
Eisenbergiella tayi s 19 2
Eisenbergiella tayi s 19 2
Eisenbergiella tayi s 19 2
Eisenbergiella tayi s 19 2
Eisenbergiella tayi s 19 2
Eisenbergiella tayi s 19 2
Bifidobacterium animalis s 9 1
Bacteroides fragilis s 9 1
Bacteroides fragilis s 9 1
Bacteroides thetaiotaomicron s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bifidobacterium animalis subsp. lactis s 9 1
Eisenbergiella tayi s 9 1
Bifidobacterium longum subsp. longum s 9 1
Bacteroides dorei s 9 1
Bacteroides dorei s 9 1
Akkermansia muciniphila s 9 1
Bacteroides fragilis YCH46 s 9 1
Bacteroides thetaiotaomicron VPI-5482 s 9 1

*p=pathogen;s=symbiont